RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZBTB5O15062 677 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 INHAP05111 366 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 HOXC6P09630 235 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PPP2R5BQ15173 497 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 NSMFQ6X4W1 530 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 TMTC3Q6ZXV5 915 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 NPLOC4Q8TAT6 608 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PIBF1Q8WXW3 757 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 TRIB2Q92519 343 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 RRP36Q96EU6 259 aaKnown RBP12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 ZNF333Q96JL9 665 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 AGXT2Q9BYV1 514 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 C22orf23Q9BZE7 217 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 RIOX1Q9H6W3 641 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 BRPF3Q9ULD4 1205 aa12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 MRPL11Q9Y3B7 192 aaKnown RBP12.75□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 LRRC37A2A6NM11 1700 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PNMA6FA0A0J9YX94 578 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PTPDC1A2A3K4 754 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PLEKHA8P1O95397 391 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 MYCP01106 439 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PGK2P07205 417 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 TAL1P17542 331 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 SMARCA1P28370 1054 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CCL14Q16627 93 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 MUM1L1Q5H9M0 696 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PIGSQ96S52 555 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 A1CFQ9NQ94 594 aaKnown RBP12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 DIS3Q9Y2L1 958 aaKnown RBP12.74□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 NID2Q14112 1375 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 NFIBO00712 420 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CYTH3O43739 400 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 COBLO75128 1261 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 TOB2Q14106 344 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 OLFML2BQ68BL8 750 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 RNF207Q6ZRF8 634 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 MCF2L2Q86YR7 1114 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CCDC82Q8N4S0 544 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 SRBD1Q8N5C6 995 aaKnown RBP12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 MAML3Q96JK9 1138 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PCDHA1Q9Y5I3 950 aa12.73□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CNTNAP5Q8WYK1 1306 aa12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CAPN15O75808 1086 aa12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CCL5P13501 91 aa12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 NEK4P51957 841 aa12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 ZNF792Q3KQV3 632 aa12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CPLX2Q6PUV4 134 aaKnown RBP12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CMTR1Q8N1G2 835 aaKnown RBP12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 IL17RAQ96F46 866 aa12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 RNF208Q9H0X6 261 aa12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CYP39A1Q9NYL5 469 aa12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 KIAA1217Q5T5P2 1943 aa12.72□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 RPTORQ8N122 1335 aa12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 DNAJC25-GNG10A0A024R161 153 aa12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CPLX1O14810 134 aa12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CALML3P27482 149 aa12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CCT2P78371 535 aaKnown RBP12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 AKAP17AQ02040 695 aaKnown RBP12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 SLC30A10Q6XR72 485 aa12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 ZNF467Q7Z7K2 595 aaPredicted RBP12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 MSL3Q8N5Y2 521 aaKnown RBP12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CLEC4DQ8WXI8 215 aa12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 ZNF274Q96GC6 653 aaPredicted RBP12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 MAF1Q9H063 256 aa12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 FLRT1Q9NZU1 646 aa12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 RBM27Q9P2N5 1060 aaKnown RBP12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 ADD3Q9UEY8 706 aaKnown RBP12.71□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 SYNGAP1Q96PV0 1343 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ASB14A6NK59 587 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 B4DLN1 442 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 hCG_1984214I3L0E3 225 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PPP1R11O60927 126 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CFBP00751 764 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CNGA1P29973 690 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PDIA3P30101 505 aaKnown RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CDC27P30260 824 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CYP2C19P33261 490 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 RBM25P49756 843 aaKnown RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 MRPL12P52815 198 aaKnown RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 AK2P54819 239 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 EVCP57679 992 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 RPS6P62753 249 aaKnown RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CACNB2Q08289 660 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 TRIM32Q13049 653 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 STK3Q13188 491 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 BAATQ14032 418 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 MTFR1Q15390 333 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SLC35G1Q2M3R5 365 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 NOL8Q76FK4 1167 aaKnown RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ZNF713Q8N859 430 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 RGS22Q8NE09 1264 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms