RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 CUL4BQ13620 913 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 CCNI2Q6ZMN8 369 aaPredicted RBP19.96■□□□□ 0.79
RETREG1-201ENST00000306320 SGMS1Q86VZ5 419 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 TBC1D31Q96DN5 1066 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 CCDC43Q96MW1 224 aaKnown RBP19.96■□□□□ 0.79
RETREG1-201ENST00000306320 REXO2Q9Y3B8 237 aaKnown RBP19.96■□□□□ 0.79
RETREG1-201ENST00000306320 UBR2Q8IWV8 1755 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 EIF4E1BA6NMX2 242 aaKnown RBP19.96■□□□□ 0.79
RETREG1-201ENST00000306320 B4DLN1 442 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 BUB1O43683 1085 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 MCM3P25205 808 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 NFRKBQ6P4R8 1299 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 SUGP1Q8IWZ8 645 aaKnown RBP19.96■□□□□ 0.79
RETREG1-201ENST00000306320 TSEN2Q8NCE0 465 aaKnown RBP19.96■□□□□ 0.79
RETREG1-201ENST00000306320 STAG1Q8WVM7 1258 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 NLRP3Q96P20 1036 aa19.96■□□□□ 0.79
RETREG1-201ENST00000306320 ZSCAN10Q96SZ4 725 aaPredicted RBP19.96■□□□□ 0.79
RETREG1-201ENST00000306320 RCCD1A6NED2 376 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 LIFRP42702 1097 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 CKAP4Q07065 602 aaKnown RBP19.95■□□□□ 0.78
RETREG1-201ENST00000306320 NNTQ13423 1086 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 PIK3AP1Q6ZUJ8 805 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 OR8K1Q8NGG5 319 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 VAT1LQ9HCJ6 419 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 LRWD1Q9UFC0 647 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 ERCC5P28715 1186 aaPredicted RBP19.95■□□□□ 0.78
RETREG1-201ENST00000306320 PSEN1P49768 467 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 SF3B2Q13435 895 aaKnown RBP19.95■□□□□ 0.78
RETREG1-201ENST00000306320 HLTFQ14527 1009 aaKnown RBP eCLIP19.95■□□□□ 0.78
RETREG1-201ENST00000306320 RILPL1Q5EBL4 403 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 WDR93Q6P2C0 686 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 CATIPQ7Z7H3 387 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 ZNF512BQ96KM6 892 aaPredicted RBP19.95■□□□□ 0.78
RETREG1-201ENST00000306320 CEP89Q96ST8 783 aa19.95■□□□□ 0.78
RETREG1-201ENST00000306320 MAGEC2Q9UBF1 373 aaPredicted RBP19.95■□□□□ 0.78
RETREG1-201ENST00000306320 ITGB4P16144 1822 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 MOCS3O95396 460 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 PAK1Q13153 545 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 NAA25Q14CX7 972 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 TYW1BQ6NUM6 668 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 TRAPPC11Q7Z392 1133 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 DZIP1Q86YF9 867 aaKnown RBP19.94■□□□□ 0.78
RETREG1-201ENST00000306320 AMPD2Q01433 879 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 KIF5AQ12840 1032 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 NFIXQ14938 502 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 KANK3Q6NY19 840 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 RIOK1Q9BRS2 568 aaKnown RBP19.94■□□□□ 0.78
RETREG1-201ENST00000306320 USP17L3A6NCW0 530 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 USP17L4A6NCW7 530 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 F8W031 263 aaPredicted RBP19.94■□□□□ 0.78
RETREG1-201ENST00000306320 PPP1R12BO60237 982 aaPredicted RBP19.94■□□□□ 0.78
RETREG1-201ENST00000306320 HIBADHP31937 336 aaKnown RBP19.94■□□□□ 0.78
RETREG1-201ENST00000306320 USP17L1Q7RTZ2 530 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 MS4A14Q96JA4 679 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 STX8Q9UNK0 236 aa19.94■□□□□ 0.78
RETREG1-201ENST00000306320 MYO1BO43795 1136 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 PLEKP08567 350 aaPredicted RBP19.93■□□□□ 0.78
RETREG1-201ENST00000306320 CEP85LQ5SZL2 805 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 IQCA1Q86XH1 822 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 ODF2LQ9ULJ1 636 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 STRCQ7RTU9 1775 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 DEXIO95424 95 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 HERVK_113P62684 666 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 SPA17Q15506 151 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 CFAP58Q5T655 872 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 APTXQ7Z2E3 356 aaKnown RBP19.93■□□□□ 0.78
RETREG1-201ENST00000306320 FBXL16Q8N461 479 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.93■□□□□ 0.78
RETREG1-201ENST00000306320 CCNL1Q9UK58 526 aaPredicted RBP19.93■□□□□ 0.78
RETREG1-201ENST00000306320 NFU1Q9UMS0 254 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 NUP98P52948 1817 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 PDHBP11177 359 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 NLRP5P59047 1200 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 RNF41Q9H4P4 317 aaPredicted RBP19.93■□□□□ 0.78
RETREG1-201ENST00000306320 HAUS4Q9H6D7 363 aa19.93■□□□□ 0.78
RETREG1-201ENST00000306320 MYH8P13535 1937 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 DISP2A7MBM2 1401 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 RAD21O60216 631 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 OPA1O60313 960 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 PEX19P40855 299 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 TUBB2AQ13885 445 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 MAPKAPK5Q8IW41 473 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 TUBB2BQ9BVA1 445 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 FAM184BQ9ULE4 1060 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 CEP131Q9UPN4 1083 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 ABCC6O95255 1503 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 PPP1R3GB7ZBB8 358 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 TUBBP07437 444 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 HDLBPQ00341 1268 aaKnown RBP19.92■□□□□ 0.78
RETREG1-201ENST00000306320 C8orf74Q6P047 294 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 RNPC3Q96LT9 517 aaKnown RBP19.92■□□□□ 0.78
RETREG1-201ENST00000306320 CCDC42Q96M95 316 aa19.92■□□□□ 0.78
RETREG1-201ENST00000306320 COL1A1P02452 1464 aaPredicted RBP19.92■□□□□ 0.78
RETREG1-201ENST00000306320 SLURP2P0DP57 97 aa19.91■□□□□ 0.78
RETREG1-201ENST00000306320 MTIF2P46199 727 aaKnown RBP19.91■□□□□ 0.78
RETREG1-201ENST00000306320 ARID5AQ03989 594 aa19.91■□□□□ 0.78
RETREG1-201ENST00000306320 ALX1Q15699 326 aa19.91■□□□□ 0.78
RETREG1-201ENST00000306320 STAG2Q8N3U4 1231 aa19.91■□□□□ 0.78
RETREG1-201ENST00000306320 SRBD1Q8N5C6 995 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms