RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 A0A1B0GW55 424 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DUX4L2P0CJ85 424 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DUX4L3P0CJ86 424 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DUX4L4P0CJ87 422 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DUX4L5P0CJ88 424 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DUX4L6P0CJ89 424 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DUX4L7P0CJ90 424 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 TTC38Q5R3I4 469 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DUX4Q9UBX2 424 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DKC1O60832 514 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRIM56-201ENST00000306085 BTN2A2Q8WVV5 523 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 GJA3Q9Y6H8 435 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 TRPV6Q9H1D0 765 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 C1orf112Q9NSG2 853 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 STX18Q9P2W9 335 aaKnown RBP14.56□□□□□ -0.08
TRIM56-201ENST00000306085 HYOU1Q9Y4L1 999 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 PCDHB13Q9Y5F0 798 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 VCAM1P19320 739 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 CCDC15Q0P6D6 951 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 FSCBQ5H9T9 825 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 TTC1Q99614 292 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 MBIPQ9NS73 344 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 NR1I2O75469 434 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 GRM8O00222 908 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 MSH2P43246 934 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DISC1Q9NRI5 854 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 C9orf84Q5VXU9 1444 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 HSPD1P10809 573 aaKnown RBP14.56□□□□□ -0.08
TRIM56-201ENST00000306085 KCNA1Q09470 495 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DEPDC1Q5TB30 811 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 NLRP9Q7RTR0 991 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 SNX19Q92543 992 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 RPS6KC1Q96S38 1066 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 KCNJ18B7U540 433 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 ZNF263O14978 683 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 ACTN1P12814 892 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 KCNJ12Q14500 433 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 ASZ1Q8WWH4 475 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 EXT2Q93063 718 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 SPZ1Q9BXG8 430 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 SBNO1A3KN83 1393 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 FAM83GA6ND36 823 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DEXIO95424 95 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 PNOCQ13519 176 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 KLC3Q6P597 504 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 ACSBG1Q96GR2 724 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 SH3GL3Q99963 347 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 ZC3H12CQ9C0D7 883 aaKnown RBP14.56□□□□□ -0.08
TRIM56-201ENST00000306085 DIABLOQ9NR28 239 aa14.56□□□□□ -0.08
TRIM56-201ENST00000306085 NIP7Q9Y221 180 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRIM56-201ENST00000306085 SPAG7O75391 227 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 DLATP10515 647 aaKnown RBP14.55□□□□□ -0.08
TRIM56-201ENST00000306085 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.55□□□□□ -0.08
TRIM56-201ENST00000306085 EPAS1Q99814 870 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 ATG3Q9NT62 314 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 RFX6Q8HWS3 928 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 LMCD1Q9NZU5 365 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 DAB1O75553 588 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 CYP4F22Q6NT55 531 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 CHCHD3Q9NX63 227 aaKnown RBP14.55□□□□□ -0.08
TRIM56-201ENST00000306085 B4E1Z4 1266 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 NBPF20Q3BBV1 942 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 DNAAF3Q8N9W5 541 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 MLKLQ8NB16 471 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 XAGE3Q8WTP9 111 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 NCOA2Q15596 1464 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 GNA14O95837 355 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 CEP78Q5JTW2 689 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
TRIM56-201ENST00000306085 CUTAO60888 179 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 SNX21Q969T3 373 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 GEMIN8Q9NWZ8 242 aaKnown RBP14.54□□□□□ -0.08
TRIM56-201ENST00000306085 IL15P40933 162 aaPredicted RBP14.54□□□□□ -0.08
TRIM56-201ENST00000306085 ANGPT1Q15389 498 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 NME9Q86XW9 330 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 BBOF1Q8ND07 529 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 DEPDC1BQ8WUY9 529 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 RRAGDQ9NQL2 400 aaPredicted RBP14.54□□□□□ -0.08
TRIM56-201ENST00000306085 GUCY2CP25092 1073 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 PA2G4Q9UQ80 394 aaKnown RBP14.54□□□□□ -0.08
TRIM56-201ENST00000306085 SLC9A1P19634 815 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 OTUD6AQ7L8S5 288 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 OR9Q1Q8NGQ5 310 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 FAM47CQ5HY64 1035 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 CC2D2BQ6DHV5 1058 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 MEIS3Q99687 375 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 NCOA5Q9HCD5 579 aaKnown RBP14.54□□□□□ -0.08
TRIM56-201ENST00000306085 SNX5Q9Y5X3 404 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 HDDC2Q7Z4H3 204 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 KLC2Q9H0B6 622 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 HFM1A2PYH4 1435 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 CTNND1O60716 968 aaKnown RBP14.54□□□□□ -0.08
TRIM56-201ENST00000306085 IFNA8P32881 189 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 PHKBQ93100 1093 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 EMILIN1Q9Y6C2 1016 aa14.54□□□□□ -0.08
TRIM56-201ENST00000306085 APOA1P02647 267 aa14.53□□□□□ -0.08
TRIM56-201ENST00000306085 NSFP46459 744 aaKnown RBP14.53□□□□□ -0.08
TRIM56-201ENST00000306085 HDAC4P56524 1084 aa14.53□□□□□ -0.08
TRIM56-201ENST00000306085 SH3GL2Q99962 352 aa14.53□□□□□ -0.08
TRIM56-201ENST00000306085 ATP11BQ9Y2G3 1177 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms