RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 BMP6P22004 513 aa25.28■■□□□ 1.64
SMAD1-201ENST00000302085 ORC2Q13416 577 aaPredicted RBP25.28■■□□□ 1.64
SMAD1-201ENST00000302085 CCDC39Q9UFE4 941 aa25.28■■□□□ 1.64
SMAD1-201ENST00000302085 NEMFO60524 1076 aa25.27■■□□□ 1.64
SMAD1-201ENST00000302085 IQUBQ8NA54 791 aa25.27■■□□□ 1.64
SMAD1-201ENST00000302085 SPATA20Q8TB22 786 aa25.27■■□□□ 1.64
SMAD1-201ENST00000302085 AMNQ9BXJ7 453 aa25.27■■□□□ 1.64
SMAD1-201ENST00000302085 GLIS2Q9BZE0 524 aaPredicted RBP25.27■■□□□ 1.64
SMAD1-201ENST00000302085 PRR12Q9ULL5 1215 aa25.27■■□□□ 1.64
SMAD1-201ENST00000302085 AFMP43652 599 aa25.27■■□□□ 1.64
SMAD1-201ENST00000302085 FAM83BQ5T0W9 1011 aa25.27■■□□□ 1.64
SMAD1-201ENST00000302085 CCDC84Q86UT8 332 aaPredicted RBP25.27■■□□□ 1.64
SMAD1-201ENST00000302085 FAM43AQ8N2R8 423 aa25.27■■□□□ 1.64
SMAD1-201ENST00000302085 SMARCE1Q969G3 411 aa25.27■■□□□ 1.64
SMAD1-201ENST00000302085 ESPNB1AK53 854 aa25.26■■□□□ 1.63
SMAD1-201ENST00000302085 ASNSP08243 561 aa25.26■■□□□ 1.63
SMAD1-201ENST00000302085 FBXO11Q86XK2 927 aa25.26■■□□□ 1.63
SMAD1-201ENST00000302085 GLT8D2Q9H1C3 349 aa25.26■■□□□ 1.63
SMAD1-201ENST00000302085 DEFB129Q9H1M3 183 aa25.26■■□□□ 1.63
SMAD1-201ENST00000302085 VCPKMTQ9H867 229 aa25.26■■□□□ 1.63
SMAD1-201ENST00000302085 RRAGDQ9NQL2 400 aaPredicted RBP25.26■■□□□ 1.63
SMAD1-201ENST00000302085 PP2D1A8MPX8 630 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 USP17L15C9J2P7 530 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 USP17L13C9JLJ4 530 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 USP17L11C9JVI0 530 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 USP17L18D6R9N7 530 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 USP17L22D6RA61 530 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 USP17L17D6RBQ6 530 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 USP17L19D6RCP7 530 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 USP17L20D6RJB6 530 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 ZNF75DP51815 510 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 USP17L24Q0WX57 530 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 PDXDC2PQ6P474 469 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 USP17L6PQ6QN14 398 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 PLA2G4DQ86XP0 818 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 PYM1Q9BRP8 204 aaKnown RBP25.25■■□□□ 1.63
SMAD1-201ENST00000302085 H7C1D1 291 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 TDP2O95551 362 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 MORC3Q14149 939 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 POTEDQ86YR6 584 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 CCDC34Q96HJ3 373 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 MTMR9Q96QG7 549 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 TRIM5Q9C035 493 aa25.25■■□□□ 1.63
SMAD1-201ENST00000302085 FHDC1Q9C0D6 1143 aaPredicted RBP25.25■■□□□ 1.63
SMAD1-201ENST00000302085 PTMAP06454 111 aaKnown RBP25.24■■□□□ 1.63
SMAD1-201ENST00000302085 STAT2P52630 851 aa25.24■■□□□ 1.63
SMAD1-201ENST00000302085 NCAPHQ15003 741 aa25.24■■□□□ 1.63
SMAD1-201ENST00000302085 ZYXQ15942 572 aaKnown RBP25.24■■□□□ 1.63
SMAD1-201ENST00000302085 SARM1Q6SZW1 724 aa25.24■■□□□ 1.63
SMAD1-201ENST00000302085 SLC37A4O43826 429 aa25.24■■□□□ 1.63
SMAD1-201ENST00000302085 LMNB1P20700 586 aa25.24■■□□□ 1.63
SMAD1-201ENST00000302085 TXLNAP40222 546 aa25.24■■□□□ 1.63
SMAD1-201ENST00000302085 KARSQ15046 597 aaKnown RBP25.24■■□□□ 1.63
SMAD1-201ENST00000302085 CCSER1Q9C0I3 900 aa25.24■■□□□ 1.63
SMAD1-201ENST00000302085 SH2D4AQ9H788 454 aa25.24■■□□□ 1.63
SMAD1-201ENST00000302085 MEIS2O14770 477 aa25.23■■□□□ 1.63
SMAD1-201ENST00000302085 SMC2O95347 1197 aa25.23■■□□□ 1.63
SMAD1-201ENST00000302085 CASP1P29466 404 aa25.23■■□□□ 1.63
SMAD1-201ENST00000302085 DPYDQ12882 1025 aa25.23■■□□□ 1.63
SMAD1-201ENST00000302085 USH1GQ495M9 461 aa25.23■■□□□ 1.63
SMAD1-201ENST00000302085 NBPF12Q5TAG4 269 aaPredicted RBP25.23■■□□□ 1.63
SMAD1-201ENST00000302085 MTRQ99707 1265 aa25.23■■□□□ 1.63
SMAD1-201ENST00000302085 TAL1P17542 331 aaPredicted RBP25.22■■□□□ 1.63
SMAD1-201ENST00000302085 PPP4R3AQ6IN85 833 aa25.22■■□□□ 1.63
SMAD1-201ENST00000302085 ZSCAN30Q86W11 494 aa25.22■■□□□ 1.63
SMAD1-201ENST00000302085 TRIML1Q8N9V2 468 aa25.22■■□□□ 1.63
SMAD1-201ENST00000302085 GPRC5DQ9NZD1 345 aa25.22■■□□□ 1.63
SMAD1-201ENST00000302085 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.22■■□□□ 1.63
SMAD1-201ENST00000302085 SMTNL1A8MU46 457 aa25.22■■□□□ 1.63
SMAD1-201ENST00000302085 UBA7P41226 1012 aa25.22■■□□□ 1.63
SMAD1-201ENST00000302085 CALCRLQ16602 461 aa25.22■■□□□ 1.63
SMAD1-201ENST00000302085 TRPM4Q8TD43 1214 aa25.22■■□□□ 1.63
SMAD1-201ENST00000302085 STAMQ92783 540 aa25.22■■□□□ 1.63
SMAD1-201ENST00000302085 AK8Q96MA6 479 aa25.22■■□□□ 1.63
SMAD1-201ENST00000302085 IKBKBO14920 756 aa25.21■■□□□ 1.63
SMAD1-201ENST00000302085 TECP42680 631 aa25.21■■□□□ 1.63
SMAD1-201ENST00000302085 GPC2Q8N158 579 aa25.21■■□□□ 1.63
SMAD1-201ENST00000302085 CHURC1Q8WUH1 139 aa25.21■■□□□ 1.63
SMAD1-201ENST00000302085 P2RX7Q99572 595 aaKnown RBP25.21■■□□□ 1.63
SMAD1-201ENST00000302085 DISC1Q9NRI5 854 aa25.21■■□□□ 1.63
SMAD1-201ENST00000302085 CTNND1O60716 968 aaKnown RBP25.2■■□□□ 1.63
SMAD1-201ENST00000302085 PLA2G6O60733 806 aa25.2■■□□□ 1.63
SMAD1-201ENST00000302085 NAALADL2Q58DX5 795 aa25.2■■□□□ 1.63
SMAD1-201ENST00000302085 ANGEL2Q5VTE6 544 aaKnown RBP25.2■■□□□ 1.63
SMAD1-201ENST00000302085 ZNF341Q9BYN7 854 aa25.2■■□□□ 1.63
SMAD1-201ENST00000302085 OPLAHO14841 1288 aa25.2■■□□□ 1.62
SMAD1-201ENST00000302085 STAT6P42226 847 aa25.2■■□□□ 1.62
SMAD1-201ENST00000302085 TXKP42681 527 aa25.2■■□□□ 1.62
SMAD1-201ENST00000302085 RRAGBQ5VZM2 374 aa25.2■■□□□ 1.62
SMAD1-201ENST00000302085 SPC24Q8NBT2 197 aa25.2■■□□□ 1.62
SMAD1-201ENST00000302085 IGSF22Q8N9C0 903 aa25.19■■□□□ 1.62
SMAD1-201ENST00000302085 MLKLQ8NB16 471 aa25.19■■□□□ 1.62
SMAD1-201ENST00000302085 KIFC2Q96AC6 838 aa25.19■■□□□ 1.62
SMAD1-201ENST00000302085 ANO3Q9BYT9 981 aa25.19■■□□□ 1.62
SMAD1-201ENST00000302085 HSD3B7Q9H2F3 369 aa25.19■■□□□ 1.62
SMAD1-201ENST00000302085 GINM1Q9NU53 330 aa25.19■■□□□ 1.62
SMAD1-201ENST00000302085 ATAD5Q96QE3 1844 aa25.19■■□□□ 1.62
SMAD1-201ENST00000302085 MYH7BA7E2Y1 1941 aa25.19■■□□□ 1.62
SMAD1-201ENST00000302085 DICER1Q9UPY3 1922 aaKnown RBP25.18■■□□□ 1.62
SMAD1-201ENST00000302085 GTPBP6O43824 516 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms