RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 RASSF7Q02833 373 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 CYB5D1Q6P9G0 228 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 PARP9Q8IXQ6 854 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 PCDHA13Q9Y5I0 950 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 MED1Q15648 1581 aaPredicted RBP12.2□□□□□ -0.46
SNX20-201ENST00000300590 STK36Q9NRP7 1315 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 CCDC189A1A4V9 331 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 GOLGA6L10A6NI86 522 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 DNM1LO00429 736 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 PROSER2Q86WR7 435 aaPredicted RBP12.19□□□□□ -0.46
SNX20-201ENST00000300590 FERMT2Q96AC1 680 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 NOC4LQ9BVI4 516 aaKnown RBP12.19□□□□□ -0.46
SNX20-201ENST00000300590 EXOC1Q9NV70 894 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 NWD2Q9ULI1 1742 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 PHKG2P15735 406 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 CDC25CP30307 473 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 EIF4A3P38919 411 aaKnown RBP12.19□□□□□ -0.46
SNX20-201ENST00000300590 MAGEA1P43355 309 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 DNM2P50570 870 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 IFT20Q8IY31 132 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 FNBP4Q8N3X1 1017 aaPredicted RBP12.19□□□□□ -0.46
SNX20-201ENST00000300590 CYFIP2Q96F07 1278 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 TPX2Q9ULW0 747 aaKnown RBP12.19□□□□□ -0.46
SNX20-201ENST00000300590 PLAAQ9Y263 795 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 HYOU1Q9Y4L1 999 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 FTCDO95954 541 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 PEX19P40855 299 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 QPCTQ16769 361 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 ANKLE2Q86XL3 938 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 ALS2CR12Q96Q35 445 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 SALL4Q9UJQ4 1053 aa12.19□□□□□ -0.46
SNX20-201ENST00000300590 MAP3K15Q6ZN16 1313 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 RASSF9O75901 435 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 KDM7AQ6ZMT4 941 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 FAM43BQ6ZT52 329 aaPredicted RBP12.18□□□□□ -0.46
SNX20-201ENST00000300590 HPS3Q969F9 1004 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 IQSEC3Q9UPP2 1182 aaPredicted RBP12.18□□□□□ -0.46
SNX20-201ENST00000300590 MTMR7Q9Y216 660 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 RIPOR2Q9Y4F9 1068 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 RASSF10A6NK89 507 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 PSMA7O14818 248 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 CIAO1O76071 339 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 EPB41P11171 864 aaKnown RBP12.18□□□□□ -0.46
SNX20-201ENST00000300590 ZBED6P86452 979 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 TDRD12Q587J7 1177 aaKnown RBP12.18□□□□□ -0.46
SNX20-201ENST00000300590 CCDC178Q5BJE1 867 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 PDXDC2PQ6P474 469 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 FUKQ8N0W3 1084 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 IQCKQ8N0W5 287 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 ZNF507Q8TCN5 953 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.18□□□□□ -0.46
SNX20-201ENST00000300590 THOC1Q96FV9 657 aaKnown RBP12.18□□□□□ -0.46
SNX20-201ENST00000300590 ATP6V1G3Q96LB4 118 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 OSBPL7Q9BZF2 842 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 KRT23Q9C075 422 aa12.18□□□□□ -0.46
SNX20-201ENST00000300590 EIF4E1BA6NMX2 242 aaKnown RBP12.17□□□□□ -0.46
SNX20-201ENST00000300590 ADAMTS3O15072 1205 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 FAM107AO95990 144 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 VEGFAP15692 232 aaPredicted RBP12.17□□□□□ -0.46
SNX20-201ENST00000300590 GCFC2P16383 781 aaKnown RBP12.17□□□□□ -0.46
SNX20-201ENST00000300590 TCP1P17987 556 aaKnown RBP12.17□□□□□ -0.46
SNX20-201ENST00000300590 KIF11P52732 1056 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 NLRP5P59047 1200 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 IL17AQ16552 155 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 RRAGAQ7L523 313 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 FAM228AQ86W67 206 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 SPATS2Q86XZ4 545 aaKnown RBP12.17□□□□□ -0.46
SNX20-201ENST00000300590 STAG1Q8WVM7 1258 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 ORAI2Q96SN7 254 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 RMND1Q9NWS8 449 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 TOPAZ1Q8N9V7 1692 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 RGPD2P0DJD1 1756 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 WDR17Q8IZU2 1322 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 FAM170AA1A519 330 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 PHF20L1A8MW92 1017 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 ARID5AQ03989 594 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 CPLX4Q7Z7G2 160 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
SNX20-201ENST00000300590 DDX42Q86XP3 938 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNX20-201ENST00000300590 IFNL2Q8IZJ0 200 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 ADSSL1Q8N142 457 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 RASGRP4Q8TDF6 673 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 A1CFQ9NQ94 594 aaKnown RBP12.17□□□□□ -0.46
SNX20-201ENST00000300590 ANKRD18BA2A2Z9 1011 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 EPHB6O15197 1021 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 GFPT1Q06210 699 aaPredicted RBP12.17□□□□□ -0.46
SNX20-201ENST00000300590 PAK2Q13177 524 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 PPP1R7Q15435 360 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 ACCSLQ4AC99 568 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 HIBCHQ6NVY1 386 aaPredicted RBP12.17□□□□□ -0.46
SNX20-201ENST00000300590 CNOT6LQ96LI5 555 aaKnown RBP12.17□□□□□ -0.46
SNX20-201ENST00000300590 SH2D4AQ9H788 454 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 ARHGAP20Q9P2F6 1191 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 TBX22Q9Y458 520 aa12.17□□□□□ -0.46
SNX20-201ENST00000300590 A6NNZ2 444 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 SRGNP10124 158 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 MEA1Q16626 185 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 TUBB8Q3ZCM7 444 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 TEX11Q8IYF3 940 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms