RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 HSP90B2PQ58FF3 399 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 LRP10Q7Z4F1 713 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 MCF2L2Q86YR7 1114 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 CTNNBL1Q8WYA6 563 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-201ENST00000299267 IFT74Q96LB3 600 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 MTFR1LQ9H019 292 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 NLRC4Q9NPP4 1024 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 FRMD4BQ9Y2L6 1034 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 ORC4O43929 436 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 RPL13P26373 211 aaKnown RBP11.35□□□□□ -0.59
GABRB3-201ENST00000299267 USP14P54578 494 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 PFKFB3Q16875 520 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-201ENST00000299267 TAF3Q5VWG9 929 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 GJA10Q969M2 543 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 RIOK1Q9BRS2 568 aaKnown RBP11.35□□□□□ -0.59
GABRB3-201ENST00000299267 DEFB129Q9H1M3 183 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 TRPC6Q9Y210 931 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 ZBTB5O15062 677 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 FOSP01100 380 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-201ENST00000299267 ANO3Q9BYT9 981 aa11.35□□□□□ -0.59
GABRB3-201ENST00000299267 PDGFDQ9GZP0 370 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-201ENST00000299267 DISP2A7MBM2 1401 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 CA8P35219 290 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 LRMPQ12912 555 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 MCM6Q14566 821 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 TXLNBQ8N3L3 684 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 FNBP1Q96RU3 617 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 ZKSCAN5Q9Y2L8 839 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 NFAT5O94916 1531 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 SFI1A8K8P3 1242 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 SLC51AQ86UW1 340 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 NT5C3AQ9H0P0 336 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 MYOZ2Q9NPC6 264 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 NDUFB10O96000 172 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 GJC1P36383 396 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 MTMR2Q13614 643 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 PCDHAC2Q9Y5I4 1007 aa11.34□□□□□ -0.59
GABRB3-201ENST00000299267 ZNF75DP51815 510 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 ADKP55263 362 aaKnown RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 Q3C1V9 767 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 RCSD1Q6JBY9 416 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 HHIPL2Q6UWX4 724 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 C11orf57Q6ZUT1 292 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 FBXO41Q8TF61 875 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 PPP1R16BQ96T49 567 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 TEKT3Q9BXF9 490 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 IMPG2Q9BZV3 1241 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 FMN2Q9NZ56 1722 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 RFX7Q2KHR2 1363 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 KRT9P35527 623 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 RASGRP2Q7LDG7 609 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 PIGOQ8TEQ8 1089 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 TBC1D5Q92609 795 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 FZD1Q9UP38 647 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 RPN1P04843 607 aaKnown RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 EPB41P11171 864 aaKnown RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 COL9A3Q14050 684 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 CTTNQ14247 550 aaKnown RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 AMIGO3Q86WK7 504 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 VGLL2Q8N8G2 317 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 SH2D3AQ9BRG2 576 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 ELP3Q9H9T3 547 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 FBXO28Q9NVF7 368 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 MED1Q15648 1581 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 A0A1W2PQ27 194 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 A0A1W2PQ64 194 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 A0A1W2PQD8 194 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 DDTLA6NHG4 134 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 TDP2O95551 362 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 PLCG1P19174 1290 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 LONP1P36776 959 aaKnown RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 NCBP1Q09161 790 aaKnown RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 GRM4Q14833 912 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 FAM178BQ8IXR5 827 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 SLFN12Q8IYM2 578 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 ZKSCAN4Q969J2 545 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-201ENST00000299267 CCDC127Q96BQ5 260 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 RMDN3Q96TC7 470 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 SYNCQ9H7C4 482 aa11.33□□□□□ -0.6
GABRB3-201ENST00000299267 TMEM110-MUSTN1A8MSY1 372 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 FDPSP14324 419 aaKnown RBP11.32□□□□□ -0.6
GABRB3-201ENST00000299267 CYLC1P35663 651 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-201ENST00000299267 USP37Q86T82 979 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 PCDHA6Q9UN73 950 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 SUGT1Q9Y2Z0 365 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 PCDHA8Q9Y5H6 950 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 SHPRHQ149N8 1683 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 PPP6R2O75170 966 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 DDNO94850 711 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-201ENST00000299267 CTDNEP1O95476 244 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 GOLGA8FQ08AF8 430 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 GOLGA8DPQ0D2H9 430 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 FAM26FQ5R3K3 315 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 ODR4Q5SWX8 454 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms