RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 BPHLQ86WA6 291 aaPredicted RBP7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 RASAL3Q86YV0 1011 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 FOXP4Q8IVH2 680 aaPredicted RBP7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 SPICE1Q8N0Z3 855 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 NEDD1Q8NHV4 660 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 ESR2Q92731 530 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 BRF1Q92994 677 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 ABHD8Q96I13 439 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 TTC14Q96N46 770 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 RNF41Q9H4P4 317 aaPredicted RBP7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 UPF2Q9HAU5 1272 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 LY9Q9HBG7 655 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 PDRG1Q9NUG6 133 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 ZNF112Q9UJU3 913 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 BRPF3Q9ULD4 1205 aa7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 ISY1Q9ULR0 285 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 ABT1Q9ULW3 272 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-201ENST00000299185 KLF18A0A0U1RQI7 1052 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 GOLGA8BA8MQT2 603 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 PEX10O60683 326 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 PTPRAP18433 802 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 NEK4P51957 841 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 EXOSC10Q01780 885 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 PTSQ03393 145 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 SLC35G1Q2M3R5 365 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 LDLRAD1Q5T700 205 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 TMEM179Q6ZVK1 233 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 ARMC9Q7Z3E5 817 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 MICU3Q86XE3 530 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 ZNF444Q8N0Y2 327 aaPredicted RBP7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 NECAB1Q8N987 351 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 OPTNQ96CV9 577 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 WNK4Q96J92 1243 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 ZSCAN10Q96SZ4 725 aaPredicted RBP7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 FEZ1Q99689 392 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 TMEM47Q9BQJ4 181 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 UBAC1Q9BSL1 405 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 KRT23Q9C075 422 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 NCOA5Q9HCD5 579 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 STX8Q9UNK0 236 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 CSADQ9Y600 493 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 ZHX2Q9Y6X8 837 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 MYH4Q9Y623 1939 aa7.62□□□□□ -1.19
DEPDC4-201ENST00000299185 LOC285556D6RIA3 1793 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 PTPRFP10586 1907 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 TTLL8A6PVC2 850 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 USP17L5A8MUK1 530 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 PPP1R12BO60237 982 aaPredicted RBP7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 AOC2O75106 756 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 PLEKHA8P1O95397 391 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 NDUFB10O96000 172 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 GOLGA8HP0CJ92 632 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 MCM5P33992 734 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 HMGCS2P54868 508 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 ANAPC15P60006 121 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 SNAP25P60880 206 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 TRDNQ13061 729 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 SPP2Q13103 211 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 KRT32Q14532 448 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 WTAPQ15007 396 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 RABEP1Q15276 862 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 MAP3K11Q16584 847 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 CCDC96Q2M329 555 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 TSGA10IPQ3SY00 556 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 TREML2Q5T2D2 321 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 TTBK2Q6IQ55 1244 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 CYP4F22Q6NT55 531 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 NFXL1Q6ZNB6 911 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 DHX32Q7L7V1 743 aaKnown RBP7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 ZNF654Q8IZM8 581 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 CMTR1Q8N1G2 835 aaKnown RBP7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 C2orf69Q8N8R5 385 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 IGDCC4Q8TDY8 1250 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 NUP133Q8WUM0 1156 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 PIBF1Q8WXW3 757 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 IL17RAQ96F46 866 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 CNNM2Q9H8M5 875 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 CABP5Q9NP86 173 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 PICK1Q9NRD5 415 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 MTMR4Q9NYA4 1195 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 CLIP2Q9UDT6 1046 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 TPCN1Q9ULQ1 816 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 CYP46A1Q9Y6A2 500 aa7.61□□□□□ -1.19
DEPDC4-201ENST00000299185 hCG_1642624A0A1W2PR95 340 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 TMEM88BA6NKF7 163 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 GOLGA8AA7E2F4 631 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 EPB41L2O43491 1005 aaKnown RBP7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 CTNND1O60716 968 aaKnown RBP7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 ARHGEF15O94989 841 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 CCT2P78371 535 aaKnown RBP7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 FGD1P98174 961 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 FAM83BQ5T0W9 1011 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 IFIT1BQ5T764 474 aaKnown RBP7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 GADL1Q6ZQY3 521 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 KCTD1Q719H9 257 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 SAPCD2Q86UD0 394 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 ANKRD13AQ8IZ07 590 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 CCDC17Q96LX7 622 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms