RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 FBXL16Q8N461 479 aa27.24■■□□□ 1.95
GBX1-201ENST00000297537 MSL3Q8N5Y2 521 aaKnown RBP27.24■■□□□ 1.95
GBX1-201ENST00000297537 TRPV1Q8NER1 839 aa27.24■■□□□ 1.95
GBX1-201ENST00000297537 CRISPLD2Q9H0B8 497 aa27.24■■□□□ 1.95
GBX1-201ENST00000297537 CYP39A1Q9NYL5 469 aa27.24■■□□□ 1.95
GBX1-201ENST00000297537 SLC12A7Q9Y666 1083 aa27.24■■□□□ 1.95
GBX1-201ENST00000297537 PFASO15067 1338 aa27.23■■□□□ 1.95
GBX1-201ENST00000297537 NFIBO00712 420 aa27.23■■□□□ 1.95
GBX1-201ENST00000297537 CALM1P0DP23 149 aa27.23■■□□□ 1.95
GBX1-201ENST00000297537 CALM2P0DP24 149 aa27.23■■□□□ 1.95
GBX1-201ENST00000297537 CALM3P0DP25 149 aa27.23■■□□□ 1.95
GBX1-201ENST00000297537 CYBAP13498 195 aa27.23■■□□□ 1.95
GBX1-201ENST00000297537 CAPN2P17655 700 aa27.23■■□□□ 1.95
GBX1-201ENST00000297537 PLXNA1Q9UIW2 1896 aa27.22■■□□□ 1.95
GBX1-201ENST00000297537 PSMA5P28066 241 aa27.22■■□□□ 1.95
GBX1-201ENST00000297537 SMARCA1P28370 1054 aa27.22■■□□□ 1.95
GBX1-201ENST00000297537 CNTN2Q02246 1040 aa27.22■■□□□ 1.95
GBX1-201ENST00000297537 BLOC1S2Q6QNY1 142 aa27.22■■□□□ 1.95
GBX1-201ENST00000297537 CTCFLQ8NI51 663 aaPredicted RBP27.22■■□□□ 1.95
GBX1-201ENST00000297537 NRBP1Q9UHY1 535 aa27.22■■□□□ 1.95
GBX1-201ENST00000297537 BRPF3Q9ULD4 1205 aa27.22■■□□□ 1.95
GBX1-201ENST00000297537 POTEB2H3BUK9 544 aa27.21■■□□□ 1.95
GBX1-201ENST00000297537 ZBTB5O15062 677 aa27.21■■□□□ 1.95
GBX1-201ENST00000297537 DHX16O60231 1041 aaKnown RBP27.21■■□□□ 1.95
GBX1-201ENST00000297537 RPS6KB1P23443 525 aa27.21■■□□□ 1.95
GBX1-201ENST00000297537 KIF5BP33176 963 aa27.21■■□□□ 1.95
GBX1-201ENST00000297537 LHX8Q68G74 356 aa27.21■■□□□ 1.95
GBX1-201ENST00000297537 APOA5Q6Q788 366 aa27.21■■□□□ 1.95
GBX1-201ENST00000297537 RGS22Q8NE09 1264 aa27.21■■□□□ 1.95
GBX1-201ENST00000297537 AGXT2Q9BYV1 514 aa27.21■■□□□ 1.95
GBX1-201ENST00000297537 ZSWIM6Q9HCJ5 1215 aa27.21■■□□□ 1.95
GBX1-201ENST00000297537 SYNGAP1Q96PV0 1343 aa27.2■■□□□ 1.95
GBX1-201ENST00000297537 PPP1R11O60927 126 aaPredicted RBP27.2■■□□□ 1.94
GBX1-201ENST00000297537 BAATQ14032 418 aaPredicted RBP27.2■■□□□ 1.94
GBX1-201ENST00000297537 USH1GQ495M9 461 aa27.2■■□□□ 1.94
GBX1-201ENST00000297537 NSMFQ6X4W1 530 aa27.2■■□□□ 1.94
GBX1-201ENST00000297537 FBXO11Q86XK2 927 aa27.2■■□□□ 1.94
GBX1-201ENST00000297537 FANCBQ8NB91 859 aa27.2■■□□□ 1.94
GBX1-201ENST00000297537 LZTS2Q9BRK4 669 aa27.2■■□□□ 1.94
GBX1-201ENST00000297537 SPZ1Q9BXG8 430 aa27.2■■□□□ 1.94
GBX1-201ENST00000297537 MAF1Q9H063 256 aa27.2■■□□□ 1.94
GBX1-201ENST00000297537 ASTN1O14525 1302 aa27.19■■□□□ 1.94
GBX1-201ENST00000297537 ABCB11O95342 1321 aa27.19■■□□□ 1.94
GBX1-201ENST00000297537 SOWAHBA6NEL2 793 aa27.19■■□□□ 1.94
GBX1-201ENST00000297537 SNAI1O95863 264 aaPredicted RBP27.19■■□□□ 1.94
GBX1-201ENST00000297537 RXRAP19793 462 aa27.19■■□□□ 1.94
GBX1-201ENST00000297537 CASTP20810 708 aaKnown RBP27.19■■□□□ 1.94
GBX1-201ENST00000297537 PRAMEF19Q5SWL8 479 aa27.19■■□□□ 1.94
GBX1-201ENST00000297537 PIGSQ96S52 555 aa27.19■■□□□ 1.94
GBX1-201ENST00000297537 AMNQ9BXJ7 453 aa27.19■■□□□ 1.94
GBX1-201ENST00000297537 TM6SF1Q9BZW5 370 aa27.19■■□□□ 1.94
GBX1-201ENST00000297537 OGDHLQ9ULD0 1010 aa27.19■■□□□ 1.94
GBX1-201ENST00000297537 EIF5BO60841 1220 aaKnown RBP27.18■■□□□ 1.94
GBX1-201ENST00000297537 SEC24BO95487 1268 aa27.18■■□□□ 1.94
GBX1-201ENST00000297537 GNAQP50148 359 aa27.18■■□□□ 1.94
GBX1-201ENST00000297537 Q6ZUG5 572 aa27.18■■□□□ 1.94
GBX1-201ENST00000297537 RUFY3Q7L099 469 aa27.18■■□□□ 1.94
GBX1-201ENST00000297537 UBE2Q1Q7Z7E8 422 aa27.18■■□□□ 1.94
GBX1-201ENST00000297537 SRBD1Q8N5C6 995 aaKnown RBP27.18■■□□□ 1.94
GBX1-201ENST00000297537 PNMA6FA0A0J9YX94 578 aa27.17■■□□□ 1.94
GBX1-201ENST00000297537 PLEKHA8P1O95397 391 aa27.17■■□□□ 1.94
GBX1-201ENST00000297537 TFRCP02786 760 aaKnown RBP27.17■■□□□ 1.94
GBX1-201ENST00000297537 ZNF865P0CJ78 1059 aaPredicted RBP27.17■■□□□ 1.94
GBX1-201ENST00000297537 MLLT1Q03111 559 aaPredicted RBP27.17■■□□□ 1.94
GBX1-201ENST00000297537 SYNE3Q6ZMZ3 975 aa27.17■■□□□ 1.94
GBX1-201ENST00000297537 RAB11FIP4Q86YS3 637 aa27.17■■□□□ 1.94
GBX1-201ENST00000297537 CCDC144CPQ8IYA2 1237 aa27.17■■□□□ 1.94
GBX1-201ENST00000297537 PURBQ96QR8 312 aaKnown RBP27.17■■□□□ 1.94
GBX1-201ENST00000297537 BAZ2BQ9UIF8 2168 aaKnown RBP27.16■■□□□ 1.94
GBX1-201ENST00000297537 SEPT4O43236 478 aa27.16■■□□□ 1.94
GBX1-201ENST00000297537 RCAN1P53805 252 aa27.16■■□□□ 1.94
GBX1-201ENST00000297537 RPS6P62753 249 aaKnown RBP27.16■■□□□ 1.94
GBX1-201ENST00000297537 RNF207Q6ZRF8 634 aa27.16■■□□□ 1.94
GBX1-201ENST00000297537 MICU3Q86XE3 530 aa27.16■■□□□ 1.94
GBX1-201ENST00000297537 IL17RAQ96F46 866 aa27.16■■□□□ 1.94
GBX1-201ENST00000297537 DDX20Q9UHI6 824 aaKnown RBP27.16■■□□□ 1.94
GBX1-201ENST00000297537 MRPL11Q9Y3B7 192 aaKnown RBP27.16■■□□□ 1.94
GBX1-201ENST00000297537 KLF18A0A0U1RQI7 1052 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 PTPDC1A2A3K4 754 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 OPLAHO14841 1288 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 ZBTB43O43298 467 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 MSCO60682 206 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 CNGA1P29973 690 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 C8orf34Q49A92 452 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 SLC30A10Q6XR72 485 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 TMTC3Q6ZXV5 915 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 ARMCX2Q7L311 632 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 HOMER1Q86YM7 354 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 TBC1D5Q92609 795 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 PCDHA1Q9Y5I3 950 aa27.15■■□□□ 1.94
GBX1-201ENST00000297537 TNRC18O15417 2968 aaPredicted RBP27.15■■□□□ 1.94
GBX1-201ENST00000297537 ASB14A6NK59 587 aa27.14■■□□□ 1.94
GBX1-201ENST00000297537 MNX1P50219 401 aaPredicted RBP27.14■■□□□ 1.94
GBX1-201ENST00000297537 EVCP57679 992 aa27.14■■□□□ 1.94
GBX1-201ENST00000297537 ANAPC15P60006 121 aa27.14■■□□□ 1.94
GBX1-201ENST00000297537 GHRHRQ02643 423 aa27.14■■□□□ 1.94
GBX1-201ENST00000297537 CMTR1Q8N1G2 835 aaKnown RBP27.14■■□□□ 1.94
GBX1-201ENST00000297537 MORC4Q8TE76 937 aa27.14■■□□□ 1.94
GBX1-201ENST00000297537 BRF1Q92994 677 aa27.14■■□□□ 1.94
GBX1-201ENST00000297537 KATNBL1Q9H079 304 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms