RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 EHD4Q9H223 541 aa16.38■□□□□ 0.21
GDF9-201ENST00000296875 DHX36Q9H2U1 1008 aaKnown RBP16.38■□□□□ 0.21
GDF9-201ENST00000296875 STK17AQ9UEE5 414 aa16.38■□□□□ 0.21
GDF9-201ENST00000296875 DNAI1Q9UI46 699 aa16.38■□□□□ 0.21
GDF9-201ENST00000296875 FER1L6Q2WGJ9 1857 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 SLC26A4O43511 780 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 PDHBP11177 359 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 CD44P16070 742 aaKnown RBP16.37■□□□□ 0.21
GDF9-201ENST00000296875 STX17P56962 302 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 GABPAQ06546 454 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 KARSQ15046 597 aaKnown RBP16.37■□□□□ 0.21
GDF9-201ENST00000296875 TSR1Q2NL82 804 aaKnown RBP16.37■□□□□ 0.21
GDF9-201ENST00000296875 LETM2Q2VYF4 491 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 CC2D2BQ6DHV5 1058 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 PODNQ7Z5L7 613 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 TMTC1Q8IUR5 882 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 MNS1Q8NEH6 495 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 ZNF397Q8NF99 534 aaPredicted RBP16.37■□□□□ 0.21
GDF9-201ENST00000296875 TTF2Q9UNY4 1162 aaKnown RBP16.37■□□□□ 0.21
GDF9-201ENST00000296875 MTMR7Q9Y216 660 aa16.37■□□□□ 0.21
GDF9-201ENST00000296875 KCNJ18B7U540 433 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 C21orf2O43822 256 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 FGFR1OPO95684 399 aaKnown RBP16.36■□□□□ 0.21
GDF9-201ENST00000296875 SNHG28P0DPA3 235 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 CASQ1P31415 396 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 HDLBPQ00341 1268 aaKnown RBP16.36■□□□□ 0.21
GDF9-201ENST00000296875 KCNJ12Q14500 433 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 TCP11X2Q5H9J9 407 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 TYW1BQ6NUM6 668 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 CNNM4Q6P4Q7 775 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 USP17L2Q6R6M4 530 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 TMEM139Q8IV31 216 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 BLZF1Q9H2G9 400 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 EXOC1Q9NV70 894 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 USP40Q9NVE5 1235 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
GDF9-201ENST00000296875 PNMA6FA0A0J9YX94 578 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 GOLGA8HP0CJ92 632 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 GCFC2P16383 781 aaKnown RBP16.36■□□□□ 0.21
GDF9-201ENST00000296875 PBX1P40424 430 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 MRPL12P52815 198 aaKnown RBP16.36■□□□□ 0.21
GDF9-201ENST00000296875 COBLL1Q53SF7 1204 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 HSP90AA4PQ58FG1 418 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 REXO1L1PQ8IX06 675 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 ADSSL1Q8N142 457 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 RASGRP4Q8TDF6 673 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 CDK5RAP3Q96JB5 506 aa16.36■□□□□ 0.21
GDF9-201ENST00000296875 ARGLU1Q9NWB6 273 aaPredicted RBP16.36■□□□□ 0.21
GDF9-201ENST00000296875 ARFGEF1Q9Y6D6 1849 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 IGKV6D-41A0A0C4DH26 115 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 MFAP3LO75121 409 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 VEGFAP15692 232 aaPredicted RBP16.35■□□□□ 0.21
GDF9-201ENST00000296875 COPB1P53618 953 aaKnown RBP16.35■□□□□ 0.21
GDF9-201ENST00000296875 PICALMQ13492 652 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 PDIA5Q14554 519 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 KRT31Q15323 416 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 APTXQ7Z2E3 356 aaKnown RBP16.35■□□□□ 0.21
GDF9-201ENST00000296875 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
GDF9-201ENST00000296875 MED15Q96RN5 788 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 PIGSQ96S52 555 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 C7orf25Q9BPX7 421 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 NUP58Q9BVL2 599 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
GDF9-201ENST00000296875 ZNF215Q9UL58 517 aaPredicted RBP16.35■□□□□ 0.21
GDF9-201ENST00000296875 A0A1W2PQC6 194 aa16.34■□□□□ 0.21
GDF9-201ENST00000296875 RIMBP2O15034 1052 aa16.34■□□□□ 0.21
GDF9-201ENST00000296875 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
GDF9-201ENST00000296875 FXR2P51116 673 aaKnown RBP eCLIP16.34■□□□□ 0.21
GDF9-201ENST00000296875 ADKP55263 362 aaKnown RBP16.34■□□□□ 0.21
GDF9-201ENST00000296875 CALCRLQ16602 461 aa16.34■□□□□ 0.21
GDF9-201ENST00000296875 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
GDF9-201ENST00000296875 CYP26C1Q6V0L0 522 aa16.34■□□□□ 0.21
GDF9-201ENST00000296875 RETREG2Q8NC44 543 aa16.34■□□□□ 0.21
GDF9-201ENST00000296875 TBCKQ8TEA7 893 aa16.34■□□□□ 0.21
GDF9-201ENST00000296875 CUL5Q93034 780 aa16.34■□□□□ 0.21
GDF9-201ENST00000296875 TRIM34Q9BYJ4 488 aa16.34■□□□□ 0.21
GDF9-201ENST00000296875 PSME4Q14997 1843 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 USP17L5A8MUK1 530 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 KIF5CO60282 957 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 FECHP22830 423 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 PRCPP42785 496 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 ZNF543Q08ER8 600 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 KMT5BQ4FZB7 885 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 SV2BQ7L1I2 683 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 TEX2Q8IWB9 1127 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 TRIM47Q96LD4 638 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 FHDC1Q9C0D6 1143 aaPredicted RBP16.33■□□□□ 0.21
GDF9-201ENST00000296875 TMEM60Q9H2L4 133 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 RIC8AQ9NPQ8 531 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.21
GDF9-201ENST00000296875 DNM2P50570 870 aa16.33■□□□□ 0.2
GDF9-201ENST00000296875 GNG11P61952 73 aa16.33■□□□□ 0.2
GDF9-201ENST00000296875 RBL2Q08999 1139 aa16.33■□□□□ 0.2
GDF9-201ENST00000296875 SEPT2Q15019 361 aa16.33■□□□□ 0.2
GDF9-201ENST00000296875 SLC35G1Q2M3R5 365 aa16.33■□□□□ 0.2
GDF9-201ENST00000296875 PPP4R3AQ6IN85 833 aa16.33■□□□□ 0.2
GDF9-201ENST00000296875 SMYD4Q8IYR2 804 aaPredicted RBP16.33■□□□□ 0.2
GDF9-201ENST00000296875 TSC1Q92574 1164 aa16.33■□□□□ 0.2
GDF9-201ENST00000296875 UBXN4Q92575 508 aa16.33■□□□□ 0.2
GDF9-201ENST00000296875 STAMQ92783 540 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms