RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 CCDC91Q7Z6B0 441 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 DIS3L2Q8IYB7 885 aaKnown RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 NAA15Q9BXJ9 866 aaKnown RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 COA1Q9GZY4 146 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 FBXO2Q9UK22 296 aaPredicted RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 TTF2Q9UNY4 1162 aaKnown RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 MYH8P13535 1937 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 ECM29Q5VYK3 1845 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 CCDC196A0A1B0GTZ2 297 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 RNF225M0QZC1 329 aaPredicted RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 PPFIA4O75335 1185 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 PRPF6O94906 941 aaKnown RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 ARHGAP25P42331 645 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 TMC4Q7Z404 712 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 SMYD4Q8IYR2 804 aaPredicted RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 SRBD1Q8N5C6 995 aaKnown RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 AFAP1L1Q8TED9 768 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 GBP3Q9H0R5 595 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 MED4Q9NPJ6 270 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 ADD3Q9UEY8 706 aaKnown RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 FAM205CA6NFA0 338 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 G3V3G9 751 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 H0YIN7 160 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 DEXIO95424 95 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 MMP1P03956 469 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 WHAMMP3Q1A5X7 153 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 DCAF8Q5TAQ9 597 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 TRIM10Q9UDY6 481 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 ACTN4O43707 911 aaKnown RBP17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 PCP11498 1178 aaKnown RBP17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 TBC1D22AQ8WUA7 517 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 MYO6Q9UM54 1294 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 LRRC37AA6NMS7 1700 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 NRXN2Q9P2S2 1712 aa17.15■□□□□ 0.34
LRRTM1-201ENST00000295057 ZMYND10O75800 440 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 CCDC172P0C7W6 258 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 AMPD2Q01433 879 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 SWT1Q5T5J6 900 aaKnown RBP17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 MCTP2Q6DN12 878 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 NOSTRINQ8IVI9 506 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 HDAC6Q9UBN7 1215 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 CEP83Q9Y592 693 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 ENC1O14682 589 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 ADAMTS3O15072 1205 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 TSPY3P0CV98 308 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 TSPY8P0CW00 308 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 BRD2P25440 801 aaKnown RBP17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 CCT6AP40227 531 aaKnown RBP17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 TUBB2AQ13885 445 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 WDR93Q6P2C0 686 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 STAG2Q8N3U4 1231 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 TUBB2BQ9BVA1 445 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 DDX4Q9NQI0 724 aaKnown RBP17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 STK32BQ9NY57 414 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 PCDHB6Q9Y5E3 794 aa17.14■□□□□ 0.33
LRRTM1-201ENST00000295057 GAKO14976 1311 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 CPP00450 1065 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 RASA1P20936 1047 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 PTPREP23469 700 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 EARS2Q5JPH6 523 aaKnown RBP17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 MMS22LQ6ZRQ5 1243 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 TMTC3Q6ZXV5 915 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 GSPT2Q8IYD1 628 aaKnown RBP17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 MICALL1Q8N3F8 863 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 STX8Q9UNK0 236 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 SYNRGQ9UMZ2 1314 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 AFMP43652 599 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 CDK8P49336 464 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 DNAJC21Q5F1R6 531 aaKnown RBP17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 TADA2BQ86TJ2 420 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 EFCAB13Q8IY85 973 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 ZNF444Q8N0Y2 327 aaPredicted RBP17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 ACBD3Q9H3P7 528 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 HPCAL4Q9UM19 191 aa17.13■□□□□ 0.33
LRRTM1-201ENST00000295057 ERCC5P28715 1186 aaPredicted RBP17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 AARSP49588 968 aaKnown RBP eCLIP17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 CACNB3P54284 484 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 SF3B2Q13435 895 aaKnown RBP17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 SPATA1Q5VX52 437 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 CCDC125Q86Z20 511 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 TRIML1Q8N9V2 468 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 BANK1Q8NDB2 785 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 WASF1Q92558 559 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 FAM163AQ96GL9 167 aaPredicted RBP17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 CPVLQ9H3G5 476 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 RABEP2Q9H5N1 569 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 TFR2Q9UP52 801 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 LAMB1P07942 1786 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 A0A087X0B3 334 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 SRGAP2O75044 1071 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 RCAN1P53805 252 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 TUBB4BP68371 445 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 TMED8Q6PL24 325 aaPredicted RBP17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 KIAA0825Q8IV33 1275 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms