RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 ATP1A1P05023 1023 aaKnown RBP13.47□□□□□ -0.25
CLPB-201ENST00000294053 SCP2P22307 547 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 PSEN1P49768 467 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 NR1I3Q14994 352 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 WHAMMP3Q1A5X7 153 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 RCSD1Q6JBY9 416 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 USP17L1Q7RTZ2 530 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 SELENOOQ9BVL4 669 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 SAP30BPQ9UHR5 308 aaKnown RBP13.47□□□□□ -0.25
CLPB-201ENST00000294053 CTNND2Q9UQB3 1225 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 ACTN4O43707 911 aaKnown RBP13.46□□□□□ -0.25
CLPB-201ENST00000294053 RFC4P35249 363 aa13.46□□□□□ -0.25
CLPB-201ENST00000294053 PPP2R5AQ15172 486 aa13.46□□□□□ -0.25
CLPB-201ENST00000294053 TMTC3Q6ZXV5 915 aa13.46□□□□□ -0.25
CLPB-201ENST00000294053 CTCFLQ8NI51 663 aaPredicted RBP13.46□□□□□ -0.25
CLPB-201ENST00000294053 NYXQ9GZU5 481 aa13.46□□□□□ -0.25
CLPB-201ENST00000294053 SLC24A3Q9HC58 644 aa13.46□□□□□ -0.25
CLPB-201ENST00000294053 RNF225M0QZC1 329 aaPredicted RBP13.46□□□□□ -0.26
CLPB-201ENST00000294053 MFAP3LO75121 409 aa13.46□□□□□ -0.26
CLPB-201ENST00000294053 KRT2P35908 639 aa13.46□□□□□ -0.26
CLPB-201ENST00000294053 KCTD19Q17RG1 926 aaPredicted RBP13.46□□□□□ -0.26
CLPB-201ENST00000294053 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.26
CLPB-201ENST00000294053 ENOX1Q8TC92 643 aaKnown RBP13.46□□□□□ -0.26
CLPB-201ENST00000294053 SYMPKQ92797 1274 aaKnown RBP13.46□□□□□ -0.26
CLPB-201ENST00000294053 CRNKL1Q9BZJ0 848 aaKnown RBP13.46□□□□□ -0.26
CLPB-201ENST00000294053 IL17RBQ9NRM6 502 aa13.46□□□□□ -0.26
CLPB-201ENST00000294053 TTF2Q9UNY4 1162 aaKnown RBP13.46□□□□□ -0.26
CLPB-201ENST00000294053 SRPRBQ9Y5M8 271 aaKnown RBP13.46□□□□□ -0.26
CLPB-201ENST00000294053 SAR1BQ9Y6B6 198 aa13.46□□□□□ -0.26
CLPB-201ENST00000294053 CLGNO14967 610 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 CXCR5P32302 372 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 COG1Q8WTW3 980 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 RRP36Q96EU6 259 aaKnown RBP13.45□□□□□ -0.26
CLPB-201ENST00000294053 SCLT1Q96NL6 688 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 AFF2P51816 1311 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 SYNRGQ9UMZ2 1314 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 TRIM75PA6NK02 468 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 PLCD1P51178 756 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 ERVK-24P63145 666 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 CNGA4Q8IV77 575 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 NOC3LQ8WTT2 800 aaKnown RBP13.45□□□□□ -0.26
CLPB-201ENST00000294053 PANX2Q96RD6 677 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 SMARCAL1Q9NZC9 954 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 IRS2Q9Y4H2 1338 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 PRPF3O43395 683 aaKnown RBP13.45□□□□□ -0.26
CLPB-201ENST00000294053 IPO7O95373 1038 aaKnown RBP13.45□□□□□ -0.26
CLPB-201ENST00000294053 GYPCP04921 128 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 FGRP09769 529 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 BRD2P25440 801 aaKnown RBP13.45□□□□□ -0.26
CLPB-201ENST00000294053 TFAP4Q01664 338 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 UBXN1Q04323 297 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 TYW1BQ6NUM6 668 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 TGFBRAP1Q8WUH2 860 aa13.45□□□□□ -0.26
CLPB-201ENST00000294053 GJD4Q96KN9 370 aaPredicted RBP13.45□□□□□ -0.26
CLPB-201ENST00000294053 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.45□□□□□ -0.26
CLPB-201ENST00000294053 NAP1L1P55209 391 aaKnown RBP13.44□□□□□ -0.26
CLPB-201ENST00000294053 E2F5Q15329 346 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 EZH2Q15910 746 aaKnown RBP13.44□□□□□ -0.26
CLPB-201ENST00000294053 RRAGBQ5VZM2 374 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 CCDC70Q6NSX1 233 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 MAPKAPK5Q8IW41 473 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 RPS6KA5O75582 802 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 GOLGA8HP0CJ92 632 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 MCM7P33993 719 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 USP14P54578 494 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 CYP27A1Q02318 531 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 PTGDRQ13258 359 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 SLC35G1Q2M3R5 365 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 KCNV1Q6PIU1 500 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 RASSF8Q8NHQ8 419 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 TNFRSF25Q93038 417 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 JAKMIP2Q96AA8 810 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 FAM205AQ6ZU69 1335 aa13.44□□□□□ -0.26
CLPB-201ENST00000294053 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
CLPB-201ENST00000294053 IDEP14735 1019 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
CLPB-201ENST00000294053 ZNF18P17022 549 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 RNASE9P60153 205 aaKnown RBP13.43□□□□□ -0.26
CLPB-201ENST00000294053 CEP89Q96ST8 783 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 NEBLO76041 1014 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 RPSAP08865 295 aaKnown RBP13.43□□□□□ -0.26
CLPB-201ENST00000294053 ERCC3P19447 782 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 CDR1P51861 262 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 IL17AQ16552 155 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 RPAINQ86UA6 219 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 SUGP1Q8IWZ8 645 aaKnown RBP13.43□□□□□ -0.26
CLPB-201ENST00000294053 HDAC7Q8WUI4 952 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 IFT81Q8WYA0 676 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 N4BP2L2Q92802 583 aaPredicted RBP13.43□□□□□ -0.26
CLPB-201ENST00000294053 ANKRD2Q9GZV1 360 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 EPN1Q9Y6I3 576 aaPredicted RBP13.43□□□□□ -0.26
CLPB-201ENST00000294053 DUSP10Q9Y6W6 482 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 HPDP32754 393 aaPredicted RBP13.43□□□□□ -0.26
CLPB-201ENST00000294053 NF2P35240 595 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 NLRP5P59047 1200 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 IFT88Q13099 833 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 TRAPPC3LQ5T215 181 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
CLPB-201ENST00000294053 CYP26C1Q6V0L0 522 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 TMTC1Q8IUR5 882 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms