RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 ATP2B2Q01814 1243 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 GABPAQ06546 454 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 ACRBPQ8NEB7 543 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 UBXN4Q92575 508 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 TRIM47Q96LD4 638 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 EPC1Q9H2F5 836 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 MYH8P13535 1937 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 ITIH6Q6UXX5 1313 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 RHOBTB3O94955 611 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 NOVP48745 357 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 ERVK-24P63145 666 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 KCNB1Q14721 858 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 HPS3Q969F9 1004 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 NAA15Q9BXJ9 866 aaKnown RBP20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 COA1Q9GZY4 146 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 ABHD10Q9NUJ1 306 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 OGFRQ9NZT2 677 aa20.63■□□□□ 0.89
SHKBP1-201ENST00000291842 TTBK2Q6IQ55 1244 aa20.62■□□□□ 0.89
SHKBP1-201ENST00000291842 GIMAP8Q8ND71 665 aaPredicted RBP20.62■□□□□ 0.89
SHKBP1-201ENST00000291842 MMTAG2Q9BU76 263 aaKnown RBP20.62■□□□□ 0.89
SHKBP1-201ENST00000291842 ZNF446Q9NWS9 450 aa20.62■□□□□ 0.89
SHKBP1-201ENST00000291842 MPHOSPH10O00566 681 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 ABL1P00519 1130 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 FCER1AP12319 257 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 ASIC1P78348 528 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 PDE4DQ08499 809 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 TRIM9Q9C026 710 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 ZMYND15Q9H091 742 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 PSMA7O14818 248 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 SLC37A4O43826 429 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 TADA3O75528 432 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 TDP2O95551 362 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 SLC16A2P36021 539 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 MAP3K9P80192 1104 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 STK4Q13043 487 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 AK8Q96MA6 479 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 KCNQ5Q9NR82 932 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 SERPINB13Q9UIV8 391 aa20.61■□□□□ 0.89
SHKBP1-201ENST00000291842 KRT9P35527 623 aa20.6■□□□□ 0.89
SHKBP1-201ENST00000291842 STIM1Q13586 685 aa20.6■□□□□ 0.89
SHKBP1-201ENST00000291842 RAD21O60216 631 aa20.6■□□□□ 0.89
SHKBP1-201ENST00000291842 SRGNP10124 158 aa20.6■□□□□ 0.89
SHKBP1-201ENST00000291842 SMARCA1P28370 1054 aa20.6■□□□□ 0.89
SHKBP1-201ENST00000291842 ADCY7P51828 1080 aa20.6■□□□□ 0.89
SHKBP1-201ENST00000291842 NFIAQ12857 509 aa20.6■□□□□ 0.89
SHKBP1-201ENST00000291842 UBE2SQ16763 222 aa20.6■□□□□ 0.89
SHKBP1-201ENST00000291842 KRT27Q7Z3Y8 459 aa20.6■□□□□ 0.89
SHKBP1-201ENST00000291842 SMAP1Q8IYB5 467 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-201ENST00000291842 G3V3G9 751 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 H2AFXP16104 143 aaPredicted RBP20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 CACNB3P54284 484 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 CALCRLQ16602 461 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 DCAF8Q5TAQ9 597 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 TTI2Q6NXR4 508 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 CDC42EP5Q6NZY7 148 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 ZFPM1Q8IX07 1006 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 EXOC1Q9NV70 894 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 PCDHAC2Q9Y5I4 1007 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 MRFAP1Q9Y605 127 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 LTBP1Q14766 1721 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 EDIL3O43854 480 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 TTLL1O95922 423 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 MYL1P05976 194 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 SHMT1P34896 483 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 CLCN6P51797 869 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 ASPRV1Q53RT3 343 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 KCTD1Q719H9 257 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 ADGRF4Q8IZF3 695 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 CSGALNACT2Q8N6G5 542 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 CCDC51Q96ER9 411 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 DUSP9Q99956 384 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 JMJD4Q9H9V9 463 aa20.59■□□□□ 0.89
SHKBP1-201ENST00000291842 IGKV6D-41A0A0C4DH26 115 aa20.58■□□□□ 0.89
SHKBP1-201ENST00000291842 PPP1R11O60927 126 aaPredicted RBP20.58■□□□□ 0.89
SHKBP1-201ENST00000291842 TNNI2P48788 182 aa20.58■□□□□ 0.89
SHKBP1-201ENST00000291842 PPP2R3AQ06190 1150 aa20.58■□□□□ 0.89
SHKBP1-201ENST00000291842 MB21D1Q8N884 522 aa20.58■□□□□ 0.89
SHKBP1-201ENST00000291842 GJA10Q969M2 543 aa20.58■□□□□ 0.89
SHKBP1-201ENST00000291842 UIMC1Q96RL1 719 aa20.58■□□□□ 0.89
SHKBP1-201ENST00000291842 CHP1Q99653 195 aa20.58■□□□□ 0.89
SHKBP1-201ENST00000291842 TTC26A0AVF1 554 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 ESYT2A0FGR8 921 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 POTEMA6NI47 508 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 FAM196BA6NMK8 535 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 B4DLN1 442 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 SHROOM1Q2M3G4 852 aaPredicted RBP20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 ZNF569Q5MCW4 686 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 ANKRD40Q6AI12 368 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 CALML4Q96GE6 196 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 SLF1Q9BQI6 1058 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 CUEDC2Q9H467 287 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 ZSWIM4Q9H7M6 989 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 DBNDD1Q9H9R9 158 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 MAGEC2Q9UBF1 373 aaPredicted RBP20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 LRWD1Q9UFC0 647 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 ADAMTSL1Q8N6G6 1762 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 FOCADQ5VW36 1801 aa20.58■□□□□ 0.88
SHKBP1-201ENST00000291842 PLIN4Q96Q06 1357 aa20.57■□□□□ 0.88
SHKBP1-201ENST00000291842 EFCAB8A8MWE9 144 aa20.57■□□□□ 0.88
SHKBP1-201ENST00000291842 SNHG28P0DPA3 235 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms