RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 ADCY6O43306 1168 aa12.29□□□□□ -0.44
SNF8-201ENST00000290330 CCDC178Q5BJE1 867 aa12.29□□□□□ -0.44
SNF8-201ENST00000290330 CCSAPQ6IQ19 270 aaPredicted RBP12.29□□□□□ -0.44
SNF8-201ENST00000290330 NSMFQ6X4W1 530 aa12.29□□□□□ -0.44
SNF8-201ENST00000290330 TDHQ8IZJ6 230 aa12.29□□□□□ -0.44
SNF8-201ENST00000290330 KLHDC9Q8NEP7 349 aa12.29□□□□□ -0.44
SNF8-201ENST00000290330 ANKS1AQ92625 1134 aa12.29□□□□□ -0.44
SNF8-201ENST00000290330 LRCH3Q96II8 777 aa12.29□□□□□ -0.44
SNF8-201ENST00000290330 TSEN34Q9BSV6 310 aaKnown RBP12.29□□□□□ -0.44
SNF8-201ENST00000290330 PRKAG2Q9UGJ0 569 aa12.29□□□□□ -0.44
SNF8-201ENST00000290330 ASTN1O14525 1302 aa12.29□□□□□ -0.44
SNF8-201ENST00000290330 A0A1W2PQ45 241 aaPredicted RBP12.28□□□□□ -0.44
SNF8-201ENST00000290330 A0A1W2PQY0 241 aa12.28□□□□□ -0.44
SNF8-201ENST00000290330 MYADML2A6NDP7 307 aa12.28□□□□□ -0.44
SNF8-201ENST00000290330 MOXD2PA6NHM9 499 aa12.28□□□□□ -0.44
SNF8-201ENST00000290330 GOLGA8HP0CJ92 632 aa12.28□□□□□ -0.44
SNF8-201ENST00000290330 CHMLP26374 656 aa12.28□□□□□ -0.44
SNF8-201ENST00000290330 CST5P28325 142 aaPredicted RBP12.28□□□□□ -0.44
SNF8-201ENST00000290330 ACLYP53396 1101 aa12.28□□□□□ -0.44
SNF8-201ENST00000290330 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
SNF8-201ENST00000290330 LRIT3Q3SXY7 679 aa12.28□□□□□ -0.44
SNF8-201ENST00000290330 GPATCH4Q5T3I0 446 aaKnown RBP12.28□□□□□ -0.44
SNF8-201ENST00000290330 PNMA1Q8ND90 353 aa12.28□□□□□ -0.44
SNF8-201ENST00000290330 PURBQ96QR8 312 aaKnown RBP12.28□□□□□ -0.44
SNF8-201ENST00000290330 ZSCAN10Q96SZ4 725 aaPredicted RBP12.28□□□□□ -0.44
SNF8-201ENST00000290330 LBHD1Q9BQE6 289 aaPredicted RBP12.28□□□□□ -0.44
SNF8-201ENST00000290330 KRT23Q9C075 422 aa12.28□□□□□ -0.44
SNF8-201ENST00000290330 RAD50Q92878 1312 aa12.28□□□□□ -0.44
SNF8-201ENST00000290330 NFIBO00712 420 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 C6orf222P0C671 652 aaPredicted RBP12.27□□□□□ -0.45
SNF8-201ENST00000290330 GJA9P57773 515 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 TLE2Q04725 743 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 BAATQ14032 418 aaPredicted RBP12.27□□□□□ -0.45
SNF8-201ENST00000290330 KCNA10Q16322 511 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 SH3RF1Q7Z6J0 888 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 ENAHQ8N8S7 591 aaPredicted RBP12.27□□□□□ -0.45
SNF8-201ENST00000290330 NUP133Q8WUM0 1156 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 RUFY2Q8WXA3 655 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 UPF3AQ9H1J1 476 aaKnown RBP12.27□□□□□ -0.45
SNF8-201ENST00000290330 KAT14Q9H8E8 782 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 CNNM2Q9H8M5 875 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 STARD7Q9NQZ5 370 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 PDLIM7Q9NR12 457 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 PNMA2Q9UL42 364 aa12.27□□□□□ -0.45
SNF8-201ENST00000290330 DDX49Q9Y6V7 483 aaKnown RBP12.27□□□□□ -0.45
SNF8-201ENST00000290330 LAMA3Q16787 3333 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.26□□□□□ -0.45
SNF8-201ENST00000290330 TRIM43BA6NCK2 446 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 CTAGE5O15320 804 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 ASGR1P07306 291 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 NKX3-2P78367 333 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 TNFAIP2Q03169 654 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 GNASQ5JWF2 1037 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 PCSK9Q8NBP7 692 aaKnown RBP12.26□□□□□ -0.45
SNF8-201ENST00000290330 MORC4Q8TE76 937 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 TRIM43Q96BQ3 446 aaPredicted RBP12.26□□□□□ -0.45
SNF8-201ENST00000290330 UBA5Q9GZZ9 404 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 CPVLQ9H3G5 476 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 SPC25Q9HBM1 224 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 PRDM5Q9NQX1 630 aaPredicted RBP12.26□□□□□ -0.45
SNF8-201ENST00000290330 PDGFCQ9NRA1 345 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 GNEQ9Y223 722 aaKnown RBP12.26□□□□□ -0.45
SNF8-201ENST00000290330 TNKSO95271 1327 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 WDR19Q8NEZ3 1342 aa12.26□□□□□ -0.45
SNF8-201ENST00000290330 PTPDC1A2A3K4 754 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 CYP21A2P08686 494 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 ALDH5A1P51649 535 aaPredicted RBP12.25□□□□□ -0.45
SNF8-201ENST00000290330 PTH1RQ03431 593 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 TAPT1Q6NXT6 567 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 SLC30A10Q6XR72 485 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 RNF207Q6ZRF8 634 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 EEPD1Q7L9B9 569 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 ANKRD33Q7Z3H0 272 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 FBXO16Q8IX29 292 aaPredicted RBP12.25□□□□□ -0.45
SNF8-201ENST00000290330 BADQ92934 168 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 GLT1D1Q96MS3 346 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 TOX2Q96NM4 488 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 UBAC1Q9BSL1 405 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 ADD3Q9UEY8 706 aaKnown RBP12.25□□□□□ -0.45
SNF8-201ENST00000290330 ELP1O95163 1332 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 LAMA4Q16363 1823 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 MCM3APO60318 1980 aa12.25□□□□□ -0.45
SNF8-201ENST00000290330 LOC102724159A0A0B4J2E5 919 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 SGSM2O43147 1006 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 PQBP1O60828 265 aaKnown RBP12.24□□□□□ -0.45
SNF8-201ENST00000290330 CLTBP09497 229 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 SMPD1P17405 629 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 ITGB8P26012 769 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 CALML3P27482 149 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 RPS6P62753 249 aaKnown RBP12.24□□□□□ -0.45
SNF8-201ENST00000290330 PWP2Q15269 919 aaKnown RBP12.24□□□□□ -0.45
SNF8-201ENST00000290330 SEC23AQ15436 765 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 CDC37Q16543 378 aaPredicted RBP12.24□□□□□ -0.45
SNF8-201ENST00000290330 ASPRV1Q53RT3 343 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 IQSEC1Q6DN90 963 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 GPR153Q6NV75 609 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 NOL8Q76FK4 1167 aaKnown RBP12.24□□□□□ -0.45
SNF8-201ENST00000290330 CYB5R4Q7L1T6 521 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms