RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 KCNA3P22001 575 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 TXLNAP40222 546 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 NR1I3Q14994 352 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 TTLL6Q8N841 843 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 PANX2Q96RD6 677 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 EPC1Q9H2F5 836 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 GPCPD1Q9NPB8 672 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 PCDHA6Q9UN73 950 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 PCDHA8Q9Y5H6 950 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 PLIN4Q96Q06 1357 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 RAD17O75943 681 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 CCDC175P0C221 793 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 IL17AQ16552 155 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 MUM1L1Q5H9M0 696 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 CT47A1Q5JQC4 288 aaPredicted RBP20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 PRMT6Q96LA8 375 aaPredicted RBP20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 SPZ1Q9BXG8 430 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 C10orf71Q711Q0 1435 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 CCDC151A5D8V7 595 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 M0R2N6 131 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 CALML3P27482 149 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 ERCC5P28715 1186 aaPredicted RBP20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 BRD3Q15059 726 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 SYMPKQ92797 1274 aaKnown RBP20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 DHX58Q96C10 678 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 NAA15Q9BXJ9 866 aaKnown RBP20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 FUT8Q9BYC5 575 aa20.62■□□□□ 0.89
PDLIM3-201ENST00000284767 A0A1B0GTH6 734 aa20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 INF2Q27J81 1249 aa20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 HSP90AA4PQ58FG1 418 aa20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 CCDC12Q8WUD4 166 aaPredicted RBP20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 TSPYL1Q9H0U9 437 aa20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 SH3GLB2Q9NR46 395 aa20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 AKR1B15C9JRZ8 316 aaPredicted RBP20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 CASP1P29466 404 aa20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 NAPAP54920 295 aa20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 ATP2C1P98194 919 aaPredicted RBP20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 SLC20A2Q08357 652 aa20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 SWAP70Q9UH65 585 aa20.61■□□□□ 0.89
PDLIM3-201ENST00000284767 RAD21O60216 631 aa20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 ZBTB7AO95365 584 aa20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 TTLL1O95922 423 aa20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 CDC25AP30304 524 aa20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 TTBK2Q6IQ55 1244 aa20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 ZBTB12Q9Y330 459 aaPredicted RBP20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 COL4A5P29400 1685 aa20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 SIPA1L1O43166 1804 aa20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 ACTN4O43707 911 aaKnown RBP20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 SPATA20Q8TB22 786 aa20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 RRP36Q96EU6 259 aaKnown RBP20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 LZTS2Q9BRK4 669 aa20.6■□□□□ 0.89
PDLIM3-201ENST00000284767 SLC16A2P36021 539 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 FKBP1AP62942 108 aaKnown RBP20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 TUBB4BP68371 445 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 TUBB2AQ13885 445 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 TUBB2BQ9BVA1 445 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 SERPINA10Q9UK55 444 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 CCDC194A0A1B0GVG4 234 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 POTEB2H3BUK9 544 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 KCTD1Q719H9 257 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 SRGAP1Q7Z6B7 1085 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 TRMT44Q8IYL2 757 aaKnown RBP20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 NEK11Q8NG66 645 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 COA7Q96BR5 231 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 CCDC34Q96HJ3 373 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 DESI2Q9BSY9 194 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 IDI2Q9BXS1 227 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 MRPL44Q9H9J2 332 aaKnown RBP20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 PSD3Q9NYI0 1048 aa20.59■□□□□ 0.89
PDLIM3-201ENST00000284767 SMCO2A6NFE2 343 aa20.58■□□□□ 0.89
PDLIM3-201ENST00000284767 GDF11O95390 407 aa20.58■□□□□ 0.89
PDLIM3-201ENST00000284767 KARSQ15046 597 aaKnown RBP20.58■□□□□ 0.89
PDLIM3-201ENST00000284767 LONRF2Q1L5Z9 754 aa20.58■□□□□ 0.89
PDLIM3-201ENST00000284767 CCDC148Q8NFR7 591 aa20.58■□□□□ 0.89
PDLIM3-201ENST00000284767 HNRNPLLQ8WVV9 542 aaKnown RBP20.58■□□□□ 0.89
PDLIM3-201ENST00000284767 STAMQ92783 540 aa20.58■□□□□ 0.89
PDLIM3-201ENST00000284767 SAMSN1Q9NSI8 373 aaKnown RBP20.58■□□□□ 0.89
PDLIM3-201ENST00000284767 SEC63Q9UGP8 760 aaKnown RBP20.58■□□□□ 0.89
PDLIM3-201ENST00000284767 AFMP43652 599 aa20.58■□□□□ 0.88
PDLIM3-201ENST00000284767 CHMP4BP1P59074 171 aa20.58■□□□□ 0.88
PDLIM3-201ENST00000284767 LARGE2Q8N3Y3 721 aa20.58■□□□□ 0.88
PDLIM3-201ENST00000284767 CEP112Q8N8E3 955 aa20.58■□□□□ 0.88
PDLIM3-201ENST00000284767 EXOC4Q96A65 974 aa20.58■□□□□ 0.88
PDLIM3-201ENST00000284767 MED15Q96RN5 788 aa20.58■□□□□ 0.88
PDLIM3-201ENST00000284767 MRIQ9BWK5 157 aa20.58■□□□□ 0.88
PDLIM3-201ENST00000284767 CLRN2A0PK11 232 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 MAP2K7O14733 419 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 HDLBPQ00341 1268 aaKnown RBP20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 CC2D2BQ6DHV5 1058 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 C4orf32Q8N8J7 132 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 ZMYND12Q9H0C1 365 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 TMEM60Q9H2L4 133 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 RIOX1Q9H6W3 641 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 ZCCHC17Q9NP64 241 aaKnown RBP20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 PSMD14O00487 310 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 SNHG28P0DPA3 235 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 TRAPPC10P48553 1259 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 SUPT20HQ8NEM7 779 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 FERMT2Q96AC1 680 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 EHD4Q9H223 541 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms