RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 MMS19Q96T76 1030 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 ABL1P00519 1130 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 ANGPTL8Q6UXH0 198 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 MAEAQ7L5Y9 396 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 NCLNQ969V3 563 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 GSDMAQ96QA5 445 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 DMRT2Q9Y5R5 561 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 HSPA6P17066 643 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 IFT88Q13099 833 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 USH1GQ495M9 461 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 MCTP2Q6DN12 878 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 DZIP3Q86Y13 1208 aaKnown RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 NR1H4Q96RI1 486 aaPredicted RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 TRIM45Q9H8W5 580 aaPredicted RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 NSFL1CQ9UNZ2 370 aaKnown RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 MRPL28Q13084 256 aaKnown RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 GNPTABQ3T906 1256 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 SKAP1Q86WV1 359 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 STX19Q8N4C7 294 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 CHMLP26374 656 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 LRMPQ12912 555 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 CAPN12Q6ZSI9 719 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 ING2Q9H160 280 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 ARHGEF11O15085 1522 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 NESP48681 1621 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 ZNF233A6NK53 670 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 B4E1Z4 1266 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 SGK1O00141 431 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 PPARGP37231 505 aaPredicted RBP9.48□□□□□ -0.89
NIPBL-201ENST00000282516 MYOCDQ8IZQ8 938 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 NUDCD1Q96RS6 583 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 EIF4G3O43432 1585 aaKnown RBP9.48□□□□□ -0.89
NIPBL-201ENST00000282516 FAM83GA6ND36 823 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 CCDC159P0C7I6 412 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 SERPINB10P48595 397 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 HDAC4P56524 1084 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 MAML1Q92585 1016 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 DHX38Q92620 1227 aaKnown RBP9.48□□□□□ -0.89
NIPBL-201ENST00000282516 TTBK2Q6IQ55 1244 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 JRKLQ9Y4A0 524 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 CABP7Q86V35 215 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 NELFCDQ8IXH7 590 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 KLHL29Q96CT2 875 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 V9GY48 417 aaPredicted RBP9.48□□□□□ -0.89
NIPBL-201ENST00000282516 SYNJ1O43426 1573 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 MAP3K1Q13233 1512 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 PCDH11XQ9BZA7 1347 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 PCDH11YQ9BZA8 1340 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 ECM2O94769 699 aaPredicted RBP9.48□□□□□ -0.89
NIPBL-201ENST00000282516 TCIRG1Q13488 830 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 FAM133BQ5BKY9 247 aaKnown RBP9.48□□□□□ -0.89
NIPBL-201ENST00000282516 PDE11AQ9HCR9 933 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 IGHDP01880 384 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 SERPINB2P05120 415 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 KHDRBS2Q5VWX1 349 aaKnown RBP9.48□□□□□ -0.89
NIPBL-201ENST00000282516 RSRC2Q7L4I2 434 aaKnown RBP9.48□□□□□ -0.89
NIPBL-201ENST00000282516 COG4Q9H9E3 785 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 CAPN11Q9UMQ6 739 aa9.48□□□□□ -0.89
NIPBL-201ENST00000282516 TMEM191BP0C7N4 346 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 ATP2B4P23634 1241 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 PGBD1Q96JS3 809 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 SFMBT1Q9UHJ3 866 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 PPIP5K1Q6PFW1 1433 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 SPAG7O75391 227 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 ACTN1P12814 892 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 NSMFQ6X4W1 530 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 RYBPQ8N488 228 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-201ENST00000282516 MRFAP1L1Q96HT8 127 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 MRPL40Q9NQ50 206 aaKnown RBP9.47□□□□□ -0.89
NIPBL-201ENST00000282516 ZNF148Q9UQR1 794 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.47□□□□□ -0.895e-7■□□□□ 8.4
NIPBL-201ENST00000282516 YWHAHQ04917 246 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-201ENST00000282516 ZBTB41Q5SVQ8 909 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 FAM81BQ96LP2 452 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 STX18Q9P2W9 335 aaKnown RBP9.47□□□□□ -0.89
NIPBL-201ENST00000282516 ZRANB2O95218 330 aaKnown RBP eCLIP9.47□□□□□ -0.89
NIPBL-201ENST00000282516 MSH2P43246 934 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 SMCR8Q8TEV9 937 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-201ENST00000282516 SLC12A6Q9UHW9 1150 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 NOS1P29475 1434 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 ANXA1P04083 346 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 CCT5P48643 541 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 MCF2L2Q86YR7 1114 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 RFX6Q8HWS3 928 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 CEP70Q8NHQ1 597 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 METTL14Q9HCE5 456 aaKnown RBP9.47□□□□□ -0.89
NIPBL-201ENST00000282516 LMCD1Q9NZU5 365 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 SUN2Q9UH99 717 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 FBXW4P57775 412 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 MYSM1Q5VVJ2 828 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 ZC3H18Q86VM9 953 aaKnown RBP9.47□□□□□ -0.89
NIPBL-201ENST00000282516 DIS3L2Q8IYB7 885 aaKnown RBP9.47□□□□□ -0.89
NIPBL-201ENST00000282516 TSC22D3Q99576 134 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 ACTR5Q9H9F9 607 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-201ENST00000282516 TLK1Q9UKI8 766 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 ABCC1P33527 1531 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 TMOD1P28289 359 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 EPHB4P54760 987 aa9.47□□□□□ -0.89
NIPBL-201ENST00000282516 RABGGTAQ92696 567 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms