RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 GSCP56915 257 aaPredicted RBP12.71□□□□□ -0.37
SCLT1-201ENST00000281142 SWT1Q5T5J6 900 aaKnown RBP12.71□□□□□ -0.37
SCLT1-201ENST00000281142 WDR59Q6PJI9 974 aa12.71□□□□□ -0.37
SCLT1-201ENST00000281142 MMS22LQ6ZRQ5 1243 aa12.71□□□□□ -0.37
SCLT1-201ENST00000281142 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.37
SCLT1-201ENST00000281142 FANCBQ8NB91 859 aa12.71□□□□□ -0.37
SCLT1-201ENST00000281142 HDAC7Q8WUI4 952 aa12.71□□□□□ -0.37
SCLT1-201ENST00000281142 CRAMP1Q96RY5 1269 aa12.71□□□□□ -0.37
SCLT1-201ENST00000281142 BSDC1Q9NW68 430 aaPredicted RBP12.71□□□□□ -0.37
SCLT1-201ENST00000281142 CEP131Q9UPN4 1083 aa12.71□□□□□ -0.37
SCLT1-201ENST00000281142 MYH6P13533 1939 aa12.71□□□□□ -0.37
SCLT1-201ENST00000281142 LRRC37AA6NMS7 1700 aa12.71□□□□□ -0.37
SCLT1-201ENST00000281142 PATL2C9JE40 543 aaKnown RBP12.71□□□□□ -0.38
SCLT1-201ENST00000281142 DPEP1P16444 411 aa12.71□□□□□ -0.38
SCLT1-201ENST00000281142 TTF1Q15361 905 aaPredicted RBP12.71□□□□□ -0.38
SCLT1-201ENST00000281142 CCDC91Q7Z6B0 441 aa12.71□□□□□ -0.38
SCLT1-201ENST00000281142 IRF2BP1Q8IU81 584 aa12.71□□□□□ -0.38
SCLT1-201ENST00000281142 LCORLQ8N3X6 602 aa12.71□□□□□ -0.38
SCLT1-201ENST00000281142 BANK1Q8NDB2 785 aa12.71□□□□□ -0.38
SCLT1-201ENST00000281142 VIPAS39Q9H9C1 493 aa12.71□□□□□ -0.38
SCLT1-201ENST00000281142 MYO1AQ9UBC5 1043 aa12.71□□□□□ -0.38
SCLT1-201ENST00000281142 PSMD14O00487 310 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 SEMA3EO15041 775 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 KLK7P49862 253 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 PMS1P54277 932 aaKnown RBP12.7□□□□□ -0.38
SCLT1-201ENST00000281142 PKN1Q16512 942 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 MIGA1Q8NAN2 632 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
SCLT1-201ENST00000281142 JAKMIP2Q96AA8 810 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 PLEKHA8P1O95397 391 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 FBXW10Q5XX13 1052 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 STYK1Q6J9G0 422 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 SMARCAL1Q9NZC9 954 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 LRRC10BA6NIK2 292 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 TDO2P48775 406 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 IRAK1P51617 712 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 CYP27A1Q02318 531 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 CHRNDQ07001 517 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 PAK1Q13153 545 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 PTGDRQ13258 359 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 IL17AQ16552 155 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 EFCAB13Q8IY85 973 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 VGLL2Q8N8G2 317 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
SCLT1-201ENST00000281142 CAGE1Q8TC20 777 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 CRACR2AQ9BSW2 395 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 SAMM50Q9Y512 469 aa12.7□□□□□ -0.38
SCLT1-201ENST00000281142 MACROD2A1Z1Q3 448 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 WTIPA6NIX2 430 aaPredicted RBP12.69□□□□□ -0.38
SCLT1-201ENST00000281142 BRD2P25440 801 aaKnown RBP12.69□□□□□ -0.38
SCLT1-201ENST00000281142 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 PRCPP42785 496 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 TGFB2P61812 414 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 TUBB4BP68371 445 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 NLGN2Q8NFZ4 835 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 AGPAT5Q9NUQ2 364 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 CD2APQ9Y5K6 639 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 GOLGA6CA6NDK9 693 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 GOLGA6DP0CG33 693 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 LTBP1Q14766 1721 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 CCNI2Q6ZMN8 369 aaPredicted RBP12.69□□□□□ -0.38
SCLT1-201ENST00000281142 GOLGA6AQ9NYA3 693 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 EHD2Q9NZN4 543 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 V9GY48 417 aaPredicted RBP12.69□□□□□ -0.38
SCLT1-201ENST00000281142 MYH13Q9UKX3 1938 aa12.69□□□□□ -0.38
SCLT1-201ENST00000281142 MROH5Q6ZUA9 1318 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 PPEF1O14829 653 aaPredicted RBP12.68□□□□□ -0.38
SCLT1-201ENST00000281142 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
SCLT1-201ENST00000281142 BBOX1O75936 387 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 PARP1P09874 1014 aaKnown RBP12.68□□□□□ -0.38
SCLT1-201ENST00000281142 SLC7A5Q01650 507 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
SCLT1-201ENST00000281142 PDXDC2PQ6P474 469 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 SND1Q7KZF4 910 aaKnown RBP eCLIP12.68□□□□□ -0.38
SCLT1-201ENST00000281142 KIAA1328Q86T90 577 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 FAM76AQ8TAV0 307 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 PSMB7Q99436 277 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 DMGDHQ9UI17 866 aaKnown RBP12.68□□□□□ -0.38
SCLT1-201ENST00000281142 RWDD2AQ9UIY3 292 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 FAM169AQ9Y6X4 670 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 A0A087WUV0 522 aaPredicted RBP12.68□□□□□ -0.38
SCLT1-201ENST00000281142 VEGFAP15692 232 aaPredicted RBP12.68□□□□□ -0.38
SCLT1-201ENST00000281142 KRT2P35908 639 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 ALX1Q15699 326 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 OR8K1Q8NGG5 319 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 HAUS4Q9H6D7 363 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 DONSONQ9NYP3 566 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 KCNG1Q9UIX4 513 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 SLC4A4Q9Y6R1 1079 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 GRIN2DO15399 1336 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 GOLGA6BA6NDN3 693 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 MINDY4BA8MYZ0 360 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 SHOX2O60902 331 aaPredicted RBP12.68□□□□□ -0.38
SCLT1-201ENST00000281142 PDE8BO95263 885 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 TUBBP07437 444 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 MATR3P43243 847 aaKnown RBP eCLIP12.68□□□□□ -0.381e-6■■■■□ 19.8
SCLT1-201ENST00000281142 RASGRF1Q13972 1273 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 MAP9Q49MG5 647 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms