RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 PCP11498 1178 aaKnown RBP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 CALRP27797 417 aaKnown RBP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 CDC25AP30304 524 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 CDC25CP30307 473 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 SARSP49591 514 aaKnown RBP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 CDR1P51861 262 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 SEC24CP53992 1094 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 AMPD2Q01433 879 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 GUCY1A3Q02108 690 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 RASGRP2Q7LDG7 609 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 FBXO33Q7Z6M2 555 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 FAM228AQ86W67 206 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 ZNF483Q8TF39 744 aaPredicted RBP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 NSUN4Q96CB9 384 aaKnown RBP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 MED15Q96RN5 788 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 NYXQ9GZU5 481 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 SH3BP1Q9Y3L3 701 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 COL16A1Q07092 1604 aaPredicted RBP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 SPATA31A5Q5VU36 1347 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 SPATA31A7Q8IWB4 1347 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 ROBO1Q9Y6N7 1651 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 ZNF185O15231 689 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 NMT2O60551 498 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 COBLO75128 1261 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 DDAH1O94760 285 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 KLRK1P26718 216 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 FXR1P51114 621 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 PLCD1P51178 756 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 STX17P56962 302 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 TROAPQ12815 778 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 CRYMQ14894 314 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 TTC38Q5R3I4 469 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 WLSQ5T9L3 541 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 NT5DC1Q5TFE4 455 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 B4GALNT4Q76KP1 1039 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 SYMPKQ92797 1274 aaKnown RBP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 FERMT2Q96AC1 680 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 MYH14Q7Z406 1995 aaKnown RBP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 KIF3CO14782 793 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 SEMA3EO15041 775 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 ATP2C2O75185 946 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 RTN2O75298 545 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 ZPR1O75312 459 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 AP1G2O75843 785 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 ATP1A1P05023 1023 aaKnown RBP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 TUBBP07437 444 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 ZNF18P17022 549 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 ARHGAP25P42331 645 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 APBA1Q02410 837 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 NR1I3Q14994 352 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 FAM98CQ17RN3 349 aaKnown RBP8.48□□□□□ -1.05
TRIM6-201ENST00000278302 TMTC3Q6ZXV5 915 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 ZNF384Q8TF68 577 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 SHISA4Q96DD7 197 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 PANX2Q96RD6 677 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 ANKRD2Q9GZV1 360 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 CYP2D6P10635 497 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 CASP1P29466 404 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 GBP2P32456 591 aaPredicted RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 MRPL12P52815 198 aaKnown RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 ERVK-24P63145 666 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 TUBB4BP68371 445 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 IRX1P78414 480 aaPredicted RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 EVX2Q03828 476 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 C2orf54Q08AI8 447 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 FUT2Q10981 343 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 PTGDRQ13258 359 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 EZH2Q15910 746 aaKnown RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 SPRED3Q2MJR0 410 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 TTMPQ5BVD1 217 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 NAA35Q5VZE5 725 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 DZIP1Q86YF9 867 aaKnown RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 SRBD1Q8N5C6 995 aaKnown RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 PARD3BQ8TEW8 1205 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 HDAC7Q8WUI4 952 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 STAMQ92783 540 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 PAGE5Q96GU1 130 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 SH3GL2Q99962 352 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 VCPKMTQ9H867 229 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 DCP1AQ9NPI6 582 aaPredicted RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 ATP8A2Q9NTI2 1148 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 MCM9Q9NXL9 1143 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 SRP68Q9UHB9 627 aaKnown RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 COL1A1P02452 1464 aaPredicted RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 MYH2Q9UKX2 1941 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 A0A1B0GUA9 196 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 KLHL33A6NCF5 533 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 ENO4A6NNW6 628 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 OPLAHO14841 1288 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 RASSF9O75901 435 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 KRT14P02533 472 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 ERCC5P28715 1186 aaPredicted RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 PRDX5P30044 214 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 SMTNP53814 917 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 SNCBQ16143 134 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 SLC10A5Q5PT55 438 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 ARMC3Q5W041 872 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 BARGINQ6ZT62 677 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 PIK3AP1Q6ZUJ8 805 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms