RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 SLC38A10Q9HBR0 1119 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 RUSC2Q8N2Y8 1516 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 FOSP01100 380 aaPredicted RBP14.43□□□□□ -0.1
PRDM16-201ENST00000270722 ST7Q9NRC1 585 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 PPME1Q9Y570 386 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 MBD4O95243 580 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 STX3Q13277 289 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 UBE2Q1Q7Z7E8 422 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 BATF3Q9NR55 127 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 PKD2L1Q9P0L9 805 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 AOX1Q06278 1338 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 IPO5O00410 1097 aaKnown RBP14.43□□□□□ -0.1
PRDM16-201ENST00000270722 RPS6KA1Q15418 735 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 LOC102724159A0A0B4J2E5 919 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 TMEM191CA6NGB0 347 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 PWP2Q15269 919 aaKnown RBP14.43□□□□□ -0.1
PRDM16-201ENST00000270722 DPP9Q86TI2 863 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.43□□□□□ -0.15e-8■■■■■ 65.3
PRDM16-201ENST00000270722 MRPL46Q9H2W6 279 aaKnown RBP14.43□□□□□ -0.1
PRDM16-201ENST00000270722 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.42□□□□□ -0.1
PRDM16-201ENST00000270722 BLMP54132 1417 aaPredicted RBP14.42□□□□□ -0.1
PRDM16-201ENST00000270722 OSBPP22059 807 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 ECE1P42892 770 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 ZSCAN23Q3MJ62 389 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 SFMBT2Q5VUG0 894 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 IGSF22Q8N9C0 903 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 ARHGAP10A1A4S6 786 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 SPDYE2BA6NHP3 402 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 EYA2O00167 538 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 SPDYE6P0CI01 402 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 OAS2P29728 719 aaKnown RBP14.42□□□□□ -0.1
PRDM16-201ENST00000270722 ANO3Q9BYT9 981 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 EMC3Q9P0I2 261 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 TEKT2Q9UIF3 430 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 NUP160Q12769 1436 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.42□□□□□ -0.1
PRDM16-201ENST00000270722 OCA2Q04671 838 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 PPP2R5CQ13362 524 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 TXLNGQ9NUQ3 528 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 DUOX2Q9NRD8 1548 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 RNASELQ05823 741 aaKnown RBP14.42□□□□□ -0.1
PRDM16-201ENST00000270722 NCAPH2Q6IBW4 605 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 ACTR5Q9H9F9 607 aaPredicted RBP14.42□□□□□ -0.1
PRDM16-201ENST00000270722 IMPACTQ9P2X3 320 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 FRMD3A2A2Y4 597 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 TSPAN9O75954 239 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 ABL1P00519 1130 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 SDSP20132 328 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 AMFRQ9UKV5 643 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
PRDM16-201ENST00000270722 TBC1D8O95759 1140 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 CFBP00751 764 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 ZSCAN20P17040 1043 aaPredicted RBP14.42□□□□□ -0.1
PRDM16-201ENST00000270722 TSC22D1Q15714 1073 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 TMCO4Q5TGY1 634 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 EFHD1Q9BUP0 239 aa14.42□□□□□ -0.1
PRDM16-201ENST00000270722 KRT8P05787 483 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 KLHL30Q0D2K2 578 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 CCDC51Q96ER9 411 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 ZFYVE1Q9HBF4 777 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 TTI1O43156 1089 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 WBP4O75554 376 aaKnown RBP14.41□□□□□ -0.1
PRDM16-201ENST00000270722 C4orf50Q6ZRC1 276 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 RNF169Q8NCN4 708 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 ELF1P32519 619 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 CUL3Q13618 768 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 CHMP6Q96FZ7 201 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 MID2Q9UJV3 735 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 ZNF189O75820 626 aaPredicted RBP14.41□□□□□ -0.1
PRDM16-201ENST00000270722 HOXC8P31273 242 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 TTC38Q5R3I4 469 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 LZTFL1Q9NQ48 299 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 KCNH3Q9ULD8 1083 aa14.41□□□□□ -0.1
PRDM16-201ENST00000270722 GOLGA8KD6RF30 607 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 GIMAP6Q6P9H5 292 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 CCDC186Q7Z3E2 898 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 BZW2Q9Y6E2 419 aaKnown RBP14.4□□□□□ -0.1
PRDM16-201ENST00000270722 GOLGA4Q13439 2230 aaKnown RBP14.4□□□□□ -0.1
PRDM16-201ENST00000270722 BRD3Q15059 726 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 NBPF20Q3BBV1 942 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.4□□□□□ -0.1
PRDM16-201ENST00000270722 SERPINB10P48595 397 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 ITKQ08881 620 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 SLC44A4Q53GD3 710 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 CREB3L3Q68CJ9 461 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 CTAGE3PQ8IX95 158 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 NLGN1Q8N2Q7 840 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 ELMOD1Q8N336 334 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 MBD2Q9UBB5 411 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 FMNL1O95466 1100 aaPredicted RBP14.4□□□□□ -0.1
PRDM16-201ENST00000270722 POLR2MP0CAP2 368 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 U2AF2P26368 475 aaKnown RBP eCLIP14.4□□□□□ -0.1
PRDM16-201ENST00000270722 RIMS2Q9UQ26 1411 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 PDE6CP51160 858 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 DKK3Q9UBP4 350 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 ANGPTL2Q9UKU9 493 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 COL4A3BPQ9Y5P4 624 aa14.4□□□□□ -0.1
PRDM16-201ENST00000270722 SURF1Q15526 300 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 FASTKD5Q7L8L6 764 aaKnown RBP14.39□□□□□ -0.11
PRDM16-201ENST00000270722 TCP11Q8WWU5 503 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms