RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 KIF5AQ12840 1032 aa30.7■■■□□ 2.5
CBX4-201ENST00000269397 PACS2Q86VP3 889 aa30.7■■■□□ 2.5
CBX4-201ENST00000269397 CAMTA2O94983 1202 aa30.69■■■□□ 2.5
CBX4-201ENST00000269397 ZBED6P86452 979 aa30.69■■■□□ 2.5
CBX4-201ENST00000269397 SECISBP2LQ93073 1101 aaKnown RBP30.69■■■□□ 2.5
CBX4-201ENST00000269397 RRP36Q96EU6 259 aaKnown RBP30.69■■■□□ 2.5
CBX4-201ENST00000269397 RPGRIP1Q96KN7 1286 aa30.69■■■□□ 2.5
CBX4-201ENST00000269397 NOC4LQ9BVI4 516 aaKnown RBP30.69■■■□□ 2.5
CBX4-201ENST00000269397 MLXIPQ9HAP2 919 aa30.69■■■□□ 2.5
CBX4-201ENST00000269397 CAPN6Q9Y6Q1 641 aa30.69■■■□□ 2.5
CBX4-201ENST00000269397 TAF1P21675 1872 aa30.69■■■□□ 2.5
CBX4-201ENST00000269397 ORC4O43929 436 aa30.69■■■□□ 2.5
CBX4-201ENST00000269397 MAGEA9P43362 315 aa30.69■■■□□ 2.5
CBX4-201ENST00000269397 PDE4DQ08499 809 aa30.69■■■□□ 2.5
CBX4-201ENST00000269397 EHD4Q9H223 541 aa30.69■■■□□ 2.5
CBX4-201ENST00000269397 PLCG1P19174 1290 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 ERCC3P19447 782 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 CXCR5P32302 372 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 SLC7A5Q01650 507 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 FKBP15Q5T1M5 1219 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 NSUN4Q96CB9 384 aaKnown RBP30.68■■■□□ 2.5
CBX4-201ENST00000269397 KAT14Q9H8E8 782 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 CCDC87Q9NVE4 849 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 DMGDHQ9UI17 866 aaKnown RBP30.68■■■□□ 2.5
CBX4-201ENST00000269397 PCDHA6Q9UN73 950 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 PCDHA8Q9Y5H6 950 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 HEATR3Q7Z4Q2 680 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 P2RX5Q93086 422 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 CCDC42Q96M95 316 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 LRRC1Q9BTT6 524 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 EHD2Q9NZN4 543 aa30.68■■■□□ 2.5
CBX4-201ENST00000269397 GOLGA6BA6NDN3 693 aa30.67■■■□□ 2.5
CBX4-201ENST00000269397 NUTM2BA6NNL0 878 aaPredicted RBP30.67■■■□□ 2.5
CBX4-201ENST00000269397 NUTM2EB1AL46 878 aaPredicted RBP30.67■■■□□ 2.5
CBX4-201ENST00000269397 PCP11498 1178 aaKnown RBP30.67■■■□□ 2.5
CBX4-201ENST00000269397 KIF5BP33176 963 aa30.67■■■□□ 2.5
CBX4-201ENST00000269397 NOP2P46087 812 aaKnown RBP30.67■■■□□ 2.5
CBX4-201ENST00000269397 SND1Q7KZF4 910 aaKnown RBP eCLIP30.67■■■□□ 2.5
CBX4-201ENST00000269397 SLAIN2Q9P270 581 aa30.67■■■□□ 2.5
CBX4-201ENST00000269397 MIIPQ5JXC2 388 aa30.67■■■□□ 2.5
CBX4-201ENST00000269397 ANKRD18AQ8IVF6 992 aa30.67■■■□□ 2.5
CBX4-201ENST00000269397 PRDX5P30044 214 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 CORO7P57737 925 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 CREG2Q8IUH2 290 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 CCDC170Q8IYT3 715 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 GOLGA6CA6NDK9 693 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 MOCS3O95396 460 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 USP17L8P0C7I0 530 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 GOLGA6DP0CG33 693 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 ATP6V1AP38606 617 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 VAV2P52735 878 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 ASIC1P78348 528 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 TFAP4Q01664 338 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 PARP10Q53GL7 1025 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 GOLGA6AQ9NYA3 693 aa30.66■■■□□ 2.5
CBX4-201ENST00000269397 SLC35G1Q2M3R5 365 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 ZNF662Q6ZS27 426 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 PNMA1Q8ND90 353 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 FAM76AQ8TAV0 307 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 PURBQ96QR8 312 aaKnown RBP30.65■■■□□ 2.5
CBX4-201ENST00000269397 NUP58Q9BVL2 599 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 MYH10P35580 1976 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 ANO9A1A5B4 782 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 EPHB6O15197 1021 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 SPA17Q15506 151 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 TXNRD1Q16881 649 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 TTC19Q6DKK2 380 aaPredicted RBP30.65■■■□□ 2.5
CBX4-201ENST00000269397 DHTKD1Q96HY7 919 aaPredicted RBP30.65■■■□□ 2.5
CBX4-201ENST00000269397 CRNKL1Q9BZJ0 848 aaKnown RBP30.65■■■□□ 2.5
CBX4-201ENST00000269397 CPVLQ9H3G5 476 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 IL17RBQ9NRM6 502 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 FAM207AQ9NSI2 230 aaPredicted RBP30.65■■■□□ 2.5
CBX4-201ENST00000269397 MCM9Q9NXL9 1143 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 TFCP2L1Q9NZI6 479 aa30.65■■■□□ 2.5
CBX4-201ENST00000269397 CCNE1P24864 410 aa30.64■■■□□ 2.5
CBX4-201ENST00000269397 C2CD5Q86YS7 1000 aa30.64■■■□□ 2.5
CBX4-201ENST00000269397 SNX12Q9UMY4 172 aa30.64■■■□□ 2.5
CBX4-201ENST00000269397 DLEC1Q9Y238 1755 aa30.64■■■□□ 2.5
CBX4-201ENST00000269397 M0R2N6 131 aa30.64■■■□□ 2.5
CBX4-201ENST00000269397 DYNLL2Q96FJ2 89 aa30.64■■■□□ 2.5
CBX4-201ENST00000269397 TTC31Q49AM3 519 aaPredicted RBP30.63■■■□□ 2.49
CBX4-201ENST00000269397 NFRKBQ6P4R8 1299 aa30.63■■■□□ 2.49
CBX4-201ENST00000269397 CABP7Q86V35 215 aa30.63■■■□□ 2.49
CBX4-201ENST00000269397 ANKRD13CQ8N6S4 541 aa30.63■■■□□ 2.49
CBX4-201ENST00000269397 IFIH1Q9BYX4 1025 aaKnown RBP30.63■■■□□ 2.49
CBX4-201ENST00000269397 TRIM9Q9C026 710 aa30.63■■■□□ 2.49
CBX4-201ENST00000269397 MINPP1Q9UNW1 487 aa30.63■■■□□ 2.49
CBX4-201ENST00000269397 EXOC5O00471 708 aa30.63■■■□□ 2.49
CBX4-201ENST00000269397 UBE4AQ14139 1066 aa30.63■■■□□ 2.49
CBX4-201ENST00000269397 DNAJC21Q5F1R6 531 aaKnown RBP30.63■■■□□ 2.49
CBX4-201ENST00000269397 AENQ8WTP8 325 aaKnown RBP30.63■■■□□ 2.49
CBX4-201ENST00000269397 ACSBG1Q96GR2 724 aa30.63■■■□□ 2.49
CBX4-201ENST00000269397 CCSER1Q9C0I3 900 aa30.63■■■□□ 2.49
CBX4-201ENST00000269397 FAM184BQ9ULE4 1060 aa30.63■■■□□ 2.49
CBX4-201ENST00000269397 ERFEQ4G0M1 354 aa30.62■■■□□ 2.49
CBX4-201ENST00000269397 ARHGAP20Q9P2F6 1191 aa30.62■■■□□ 2.49
CBX4-201ENST00000269397 A0A1B0GUL6 1792 aa30.62■■■□□ 2.49
CBX4-201ENST00000269397 USP17L3A6NCW0 530 aa30.62■■■□□ 2.49
CBX4-201ENST00000269397 USP17L4A6NCW7 530 aa30.62■■■□□ 2.49
CBX4-201ENST00000269397 USP17L1Q7RTZ2 530 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms