RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 LAD1O00515 517 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 EEF1GP26641 437 aaKnown RBP13.99□□□□□ -0.17
BEST3-201ENST00000266661 BEND6Q5SZJ8 279 aaPredicted RBP13.99□□□□□ -0.17
BEST3-201ENST00000266661 WDR59Q6PJI9 974 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 ZNF662Q6ZS27 426 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 SH3RF3Q8TEJ3 882 aaPredicted RBP13.99□□□□□ -0.17
BEST3-201ENST00000266661 PNKPQ96T60 521 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 DUSP9Q99956 384 aaKnown RBP13.99□□□□□ -0.17
BEST3-201ENST00000266661 USP17L3A6NCW0 530 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 USP17L4A6NCW7 530 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 CHRNA5P30532 468 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 SMC1AQ14683 1233 aaKnown RBP13.99□□□□□ -0.17
BEST3-201ENST00000266661 GRIK5Q16478 980 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 MEA1Q16626 185 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 WHAMMP3Q1A5X7 153 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 C15orf52Q6ZUT6 534 aaKnown RBP13.99□□□□□ -0.17
BEST3-201ENST00000266661 USP17L1Q7RTZ2 530 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 NAPGQ99747 312 aaPredicted RBP13.99□□□□□ -0.17
BEST3-201ENST00000266661 TTYH3Q9C0H2 523 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 CAPN11Q9UMQ6 739 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 MAPK8IP1Q9UQF2 711 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 EPN1Q9Y6I3 576 aaPredicted RBP13.99□□□□□ -0.17
BEST3-201ENST00000266661 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 NDUFA10O95299 355 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 TFRCP02786 760 aaKnown RBP13.98□□□□□ -0.17
BEST3-201ENST00000266661 RASA1P20936 1047 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 GTF2E1P29083 439 aaPredicted RBP13.98□□□□□ -0.17
BEST3-201ENST00000266661 NOVP48745 357 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 UBXN1Q04323 297 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 TAF3Q5VWG9 929 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 CNBD1Q8NA66 436 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 ANKRD20A12PQ8NF67 263 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 OR8K1Q8NGG5 319 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 NUP88Q99567 741 aaPredicted RBP13.98□□□□□ -0.17
BEST3-201ENST00000266661 SLF1Q9BQI6 1058 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 TMEM47Q9BQJ4 181 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 ZMYND12Q9H0C1 365 aa13.98□□□□□ -0.17
BEST3-201ENST00000266661 PUF60Q9UHX1 559 aaKnown RBP13.98□□□□□ -0.17
BEST3-201ENST00000266661 COL11A2P13942 1736 aaPredicted RBP13.98□□□□□ -0.17
BEST3-201ENST00000266661 CCDC194A0A1B0GVG4 234 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 SRGNP10124 158 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 HERVK_113P62684 666 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 INF2Q27J81 1249 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 KIF4BQ2VIQ3 1234 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 COBLL1Q53SF7 1204 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 TPTE2Q6XPS3 522 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 SLC51AQ86UW1 340 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 DZIP1Q86YF9 867 aaKnown RBP13.97□□□□□ -0.17
BEST3-201ENST00000266661 CCDC148Q8NFR7 591 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 WDR66Q8TBY9 1149 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 NOC3LQ8WTT2 800 aaKnown RBP13.97□□□□□ -0.17
BEST3-201ENST00000266661 DHTKD1Q96HY7 919 aaPredicted RBP13.97□□□□□ -0.17
BEST3-201ENST00000266661 LZTS2Q9BRK4 669 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 SYT17Q9BSW7 474 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 SPZ1Q9BXG8 430 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 CUEDC2Q9H467 287 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 MAGEF1Q9HAY2 307 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 L1RE1Q9UN81 338 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 SNED1Q8TER0 1413 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 DDX60LQ5H9U9 1706 aaKnown RBP13.97□□□□□ -0.17
BEST3-201ENST00000266661 PSMD14O00487 310 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 OAS2P29728 719 aaKnown RBP13.97□□□□□ -0.17
BEST3-201ENST00000266661 AK8Q96MA6 479 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 C7orf25Q9BPX7 421 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 ZSWIM4Q9H7M6 989 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 ZCCHC17Q9NP64 241 aaKnown RBP13.97□□□□□ -0.17
BEST3-201ENST00000266661 JAG2Q9Y219 1238 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 LEMD3Q9Y2U8 911 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 MYH8P13535 1937 aa13.97□□□□□ -0.17
BEST3-201ENST00000266661 H3BQF6 201 aa13.96□□□□□ -0.17
BEST3-201ENST00000266661 LDHBP07195 334 aaKnown RBP13.96□□□□□ -0.17
BEST3-201ENST00000266661 TRAPPC11Q7Z392 1133 aa13.96□□□□□ -0.17
BEST3-201ENST00000266661 SLC44A5Q8NCS7 719 aa13.96□□□□□ -0.17
BEST3-201ENST00000266661 MMTAG2Q9BU76 263 aaKnown RBP13.96□□□□□ -0.17
BEST3-201ENST00000266661 RTFDC1Q9BY42 306 aaPredicted RBP13.96□□□□□ -0.17
BEST3-201ENST00000266661 SMARCA1P28370 1054 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 UBA7P41226 1012 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 DNM2P50570 870 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 SLC4A8Q2Y0W8 1093 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 TRIM9Q9C026 710 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 HAUS4Q9H6D7 363 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 TRIM10Q9UDY6 481 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 MYO6Q9UM54 1294 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 LUC7L2Q9Y383 392 aaKnown RBP13.95□□□□□ -0.18
BEST3-201ENST00000266661 BRCA1P38398 1863 aaKnown RBP13.95□□□□□ -0.18
BEST3-201ENST00000266661 PSMA7O14818 248 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 POLR3GO15318 223 aaPredicted RBP13.95□□□□□ -0.18
BEST3-201ENST00000266661 DPEP1P16444 411 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 PLCG1P19174 1290 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 CCNE1P24864 410 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 GSTO1P78417 241 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 DIXDC1Q155Q3 683 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 PAPD7Q5XG87 772 aaKnown RBP13.95□□□□□ -0.18
BEST3-201ENST00000266661 HEATR3Q7Z4Q2 680 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 ZSCAN29Q8IWY8 852 aaPredicted RBP13.95□□□□□ -0.18
BEST3-201ENST00000266661 MKNK2Q9HBH9 465 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 NAV1Q8NEY1 1877 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 C10orf71Q711Q0 1435 aa13.95□□□□□ -0.18
BEST3-201ENST00000266661 KLRF2D3W0D1 207 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 EDIL3O43854 480 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms