RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 USH1GQ495M9 461 aa13.13□□□□□ -0.31
SCAF11-201ENST00000266589 DTHD1Q6ZMT9 781 aa13.13□□□□□ -0.31
SCAF11-201ENST00000266589 GLT8D2Q9H1C3 349 aa13.13□□□□□ -0.31
SCAF11-201ENST00000266589 GGA3Q9NZ52 723 aa13.13□□□□□ -0.31
SCAF11-201ENST00000266589 TUBE1Q9UJT0 475 aa13.13□□□□□ -0.31
SCAF11-201ENST00000266589 MYH7BA7E2Y1 1941 aa13.13□□□□□ -0.31
SCAF11-201ENST00000266589 YBX3P16989 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCAF11-201ENST00000266589 PRPHP41219 470 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 DPCR1Q3MIW9 517 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 DCAF15Q66K64 600 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 CEP57L1Q8IYX8 460 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 UTRNP46939 3433 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 USP17L15C9J2P7 530 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 USP17L13C9JLJ4 530 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 USP17L11C9JVI0 530 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 USP17L18D6R9N7 530 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 USP17L22D6RA61 530 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 USP17L17D6RBQ6 530 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 USP17L19D6RCP7 530 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 USP17L20D6RJB6 530 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 DDNO94850 711 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-201ENST00000266589 OR52Z1P0C646 297 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-201ENST00000266589 NLRP12P59046 1061 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 PLCB2Q00722 1185 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 MDM2Q00987 491 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-201ENST00000266589 USP17L24Q0WX57 530 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 ORC2Q13416 577 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-201ENST00000266589 POSTNQ15063 836 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 PRAMEF18Q5VWM3 479 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 KANK3Q6NY19 840 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 USP17L6PQ6QN14 398 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
SCAF11-201ENST00000266589 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 INPP5BP32019 993 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 TXLNAP40222 546 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 IQCB1Q15051 598 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 GRAMD1CQ8IYS0 662 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 CHURC1Q8WUH1 139 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 KIFC2Q96AC6 838 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 TRIM44Q96DX7 344 aaPredicted RBP13.11□□□□□ -0.31
SCAF11-201ENST00000266589 HOOK2Q96ED9 719 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
SCAF11-201ENST00000266589 PCDHA5Q9Y5H7 936 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 TDP2O95551 362 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 SLFN14P0C7P3 912 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 TAL1P17542 331 aaPredicted RBP13.11□□□□□ -0.31
SCAF11-201ENST00000266589 CDC25AP30304 524 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 ISM2Q6H9L7 571 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 FAM160B2Q86V87 743 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 FEM1BQ9UK73 627 aa13.11□□□□□ -0.31
SCAF11-201ENST00000266589 MEIS2O14770 477 aa13.1□□□□□ -0.31
SCAF11-201ENST00000266589 SLC37A4O43826 429 aa13.1□□□□□ -0.31
SCAF11-201ENST00000266589 EDIL3O43854 480 aa13.1□□□□□ -0.31
SCAF11-201ENST00000266589 PLA2G6O60733 806 aa13.1□□□□□ -0.31
SCAF11-201ENST00000266589 ADCY5O95622 1261 aa13.1□□□□□ -0.31
SCAF11-201ENST00000266589 LMOD1P29536 600 aaPredicted RBP13.1□□□□□ -0.31
SCAF11-201ENST00000266589 PYM1Q9BRP8 204 aaKnown RBP13.1□□□□□ -0.31
SCAF11-201ENST00000266589 PP2D1A8MPX8 630 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 BECN2A8MW95 431 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 GOLGA6L19H0YKK7 550 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 AP5Z1O43299 807 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 AP3B2Q13367 1082 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 E2F4Q16254 413 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 CCDC174Q6PII3 467 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
SCAF11-201ENST00000266589 DHX40Q8IX18 779 aaKnown RBP13.09□□□□□ -0.31
SCAF11-201ENST00000266589 IQUBQ8NA54 791 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 PAGE5Q96GU1 130 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 WRNIP1Q96S55 665 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 ANO3Q9BYT9 981 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 KIAA1683Q9H0B3 1180 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 RANBP17Q9H2T7 1088 aaKnown RBP13.09□□□□□ -0.31
SCAF11-201ENST00000266589 FBXO28Q9NVF7 368 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 PPP2R3BQ9Y5P8 575 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 POLR2AP24928 1970 aaKnown RBP13.09□□□□□ -0.31
SCAF11-201ENST00000266589 WDR46O15213 610 aaKnown RBP13.09□□□□□ -0.31
SCAF11-201ENST00000266589 AFMP43652 599 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 TRAF1Q13077 416 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 KARSQ15046 597 aaKnown RBP13.09□□□□□ -0.31
SCAF11-201ENST00000266589 CALCRLQ16602 461 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 PPP4R3AQ6IN85 833 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 SCYL3Q8IZE3 742 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 AOPEPQ8N6M6 819 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 LPAR1Q92633 364 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 SMARCE1Q969G3 411 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 MTMR9Q96QG7 549 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 BPIFA3Q9BQP9 254 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 ZNF112Q9UJU3 913 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 FZD1Q9UP38 647 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 SSC5DA1L4H1 1573 aa13.09□□□□□ -0.31
SCAF11-201ENST00000266589 SMCHD1A6NHR9 2005 aa13.08□□□□□ -0.31
SCAF11-201ENST00000266589 OPLAHO14841 1288 aa13.08□□□□□ -0.32
SCAF11-201ENST00000266589 UBA7P41226 1012 aa13.08□□□□□ -0.32
SCAF11-201ENST00000266589 TECP42680 631 aa13.08□□□□□ -0.32
SCAF11-201ENST00000266589 MTMR2Q13614 643 aa13.08□□□□□ -0.32
SCAF11-201ENST00000266589 NT5DC1Q5TFE4 455 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms