RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 BRIP1Q9BX63 1249 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 CAPN6Q9Y6Q1 641 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 PSMA7O14818 248 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 ZNF263O14978 683 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 BUB1O43683 1085 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 KLRC4O43908 158 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 RAD21O60216 631 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 EIF3JO75822 258 aaKnown RBP18.79■□□□□ 0.6
SQLE-201ENST00000265896 WHAMMP3Q1A5X7 153 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 MARCH10Q8NA82 808 aaPredicted RBP18.79■□□□□ 0.6
SQLE-201ENST00000265896 RRP15Q9Y3B9 282 aaKnown RBP18.79■□□□□ 0.6
SQLE-201ENST00000265896 DDAH1O94760 285 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 CALM1P0DP23 149 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 CALM2P0DP24 149 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 CALM3P0DP25 149 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 PROCA1Q8NCQ7 364 aaPredicted RBP18.79■□□□□ 0.6
SQLE-201ENST00000265896 PCDHA4Q9UN74 947 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.79■□□□□ 0.6
SQLE-201ENST00000265896 CICQ96RK0 1608 aaPredicted RBP18.79■□□□□ 0.6
SQLE-201ENST00000265896 NID2Q14112 1375 aa18.79■□□□□ 0.6
SQLE-201ENST00000265896 TULP2O00295 520 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 NAPAP54920 295 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 TRAPPC11Q7Z392 1133 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 FRMPD2Q68DX3 1309 aaPredicted RBP18.78■□□□□ 0.6
SQLE-201ENST00000265896 H7C1D1 291 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 BMP15O95972 392 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 CACNB1Q02641 598 aaPredicted RBP18.78■□□□□ 0.6
SQLE-201ENST00000265896 SPAG1Q07617 926 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 NFRKBQ6P4R8 1299 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 CABP7Q86V35 215 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 CCDC51Q96ER9 411 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 CRACR2AQ9BSW2 395 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 ITIH6Q6UXX5 1313 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 IPO7O95373 1038 aaKnown RBP18.78■□□□□ 0.6
SQLE-201ENST00000265896 SSBP05455 408 aaKnown RBP eCLIP18.78■□□□□ 0.6
SQLE-201ENST00000265896 TTI2Q6NXR4 508 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 TANGO6Q9C0B7 1094 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 NLRC4Q9NPP4 1024 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 RMND1Q9NWS8 449 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 ANKIB1Q9P2G1 1089 aa18.78■□□□□ 0.6
SQLE-201ENST00000265896 ZNF804BA4D1E1 1349 aa18.77■□□□□ 0.6
SQLE-201ENST00000265896 EXOC1Q9NV70 894 aa18.77■□□□□ 0.6
SQLE-201ENST00000265896 DMGDHQ9UI17 866 aaKnown RBP18.77■□□□□ 0.6
SQLE-201ENST00000265896 ESYT3A0FGR9 886 aa18.77■□□□□ 0.59
SQLE-201ENST00000265896 SYF2O95926 243 aaKnown RBP18.77■□□□□ 0.59
SQLE-201ENST00000265896 USP14P54578 494 aa18.77■□□□□ 0.59
SQLE-201ENST00000265896 RPS8P62241 208 aaKnown RBP18.77■□□□□ 0.59
SQLE-201ENST00000265896 PARP10Q53GL7 1025 aa18.77■□□□□ 0.59
SQLE-201ENST00000265896 ZNF507Q8TCN5 953 aa18.77■□□□□ 0.59
SQLE-201ENST00000265896 MS4A14Q96JA4 679 aa18.77■□□□□ 0.59
SQLE-201ENST00000265896 DEF6Q9H4E7 631 aa18.77■□□□□ 0.59
SQLE-201ENST00000265896 MAD2L2Q9UI95 211 aa18.77■□□□□ 0.59
SQLE-201ENST00000265896 MYH3P11055 1940 aa18.77■□□□□ 0.59
SQLE-201ENST00000265896 SEMA3EO15041 775 aa18.76■□□□□ 0.59
SQLE-201ENST00000265896 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
SQLE-201ENST00000265896 GOLGA5Q8TBA6 731 aa18.76■□□□□ 0.59
SQLE-201ENST00000265896 CCDC42Q96M95 316 aa18.76■□□□□ 0.59
SQLE-201ENST00000265896 ZNHIT6Q9NWK9 470 aaKnown RBP18.76■□□□□ 0.59
SQLE-201ENST00000265896 SHANK3Q9BYB0 1731 aa18.76■□□□□ 0.59
SQLE-201ENST00000265896 POTEMA6NI47 508 aa18.76■□□□□ 0.59
SQLE-201ENST00000265896 TULP1O00294 542 aaPredicted RBP18.76■□□□□ 0.59
SQLE-201ENST00000265896 KIF5BP33176 963 aa18.76■□□□□ 0.59
SQLE-201ENST00000265896 LONP1P36776 959 aaKnown RBP18.76■□□□□ 0.59
SQLE-201ENST00000265896 UBE4AQ14139 1066 aa18.76■□□□□ 0.59
SQLE-201ENST00000265896 LRRC1Q9BTT6 524 aa18.76■□□□□ 0.59
SQLE-201ENST00000265896 BSDC1Q9NW68 430 aaPredicted RBP18.76■□□□□ 0.59
SQLE-201ENST00000265896 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.76■□□□□ 0.59
SQLE-201ENST00000265896 ZSCAN5CA6NGD5 496 aaPredicted RBP18.75■□□□□ 0.59
SQLE-201ENST00000265896 KLRF2D3W0D1 207 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 STIM1Q13586 685 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 LRRC31Q6UY01 552 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 SND1Q7KZF4 910 aaKnown RBP eCLIP18.75■□□□□ 0.597e-8■■■□□ 16.3
SQLE-201ENST00000265896 AMIGO3Q86WK7 504 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 HNRNPLLQ8WVV9 542 aaKnown RBP18.75■□□□□ 0.59
SQLE-201ENST00000265896 CAPN11Q9UMQ6 739 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 PACSIN2Q9UNF0 486 aaPredicted RBP18.75■□□□□ 0.59
SQLE-201ENST00000265896 RRAGAQ7L523 313 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 ZNF444Q8N0Y2 327 aaPredicted RBP18.75■□□□□ 0.59
SQLE-201ENST00000265896 COA7Q96BR5 231 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 NUDT12Q9BQG2 462 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 TMEM47Q9BQJ4 181 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 HAUS4Q9H6D7 363 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 PPP2R5BQ15173 497 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 KCTD16Q68DU8 428 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 NBPF5PQ86XG9 351 aaPredicted RBP18.75■□□□□ 0.59
SQLE-201ENST00000265896 SALL4Q9UJQ4 1053 aa18.75■□□□□ 0.59
SQLE-201ENST00000265896 SMCO2A6NFE2 343 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 KRT86O43790 486 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 SRLQ86TD4 932 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 LINC00116Q8NCU8 138 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 DNAJC7Q99615 494 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 SELENOOQ9BVL4 669 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 TRIM9Q9C026 710 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 TCP11L1Q9NUJ3 509 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 GFPT1Q06210 699 aaPredicted RBP18.74■□□□□ 0.59
SQLE-201ENST00000265896 NFIXQ14938 502 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 KIAA0895Q8NCT3 520 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 P2RX5Q93086 422 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 PIGSQ96S52 555 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 SEMA6BQ9H3T3 888 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms