RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CALML3P27482 149 aa8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 ADD1P35611 737 aaKnown RBP8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 METAP2P50579 478 aaKnown RBP eCLIP8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 PKN2Q16513 984 aaKnown RBP8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 RTN1Q16799 776 aa8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 ANO1Q5XXA6 986 aa8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 SYNE3Q6ZMZ3 975 aa8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 FANCBQ8NB91 859 aa8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 SHCBP1Q8NEM2 672 aa8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 GPKOWQ92917 476 aaPredicted RBP eCLIP8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 PDRG1Q9NUG6 133 aa8.42□□□□□ -1.06
DEPDC1B-201ENST00000265036 SLC15A5A6NIM6 579 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 KIF5BP33176 963 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 PRAMEF19Q5SWL8 479 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 TBC1D5Q92609 795 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 USP6NLQ92738 828 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 ZNF333Q96JL9 665 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 C22orf23Q9BZE7 217 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 UNC93B1Q9H1C4 597 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 WDR19Q8NEZ3 1342 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 POTEFA5A3E0 1075 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 ASTN1O14525 1302 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 ATP2A1O14983 1001 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 LARGE1O95461 756 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 HMGCRP04035 888 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 NEK4P51957 841 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 OAZ1P54368 228 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 AK2P54819 239 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 TMTC3Q6ZXV5 915 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 FBXO11Q86XK2 927 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 TMTC2Q8N394 836 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 SLAIN1Q8ND83 568 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 CNTNAP5Q8WYK1 1306 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 PHKBQ93100 1093 aa8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 LENG1Q96BZ8 264 aaPredicted RBP8.41□□□□□ -1.06
DEPDC1B-201ENST00000265036 ZBTB5O15062 677 aa8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 EPB41L2O43491 1005 aaKnown RBP8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 CFBP00751 764 aa8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 CCND3P30281 292 aaPredicted RBP8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 HOXA13P31271 388 aaPredicted RBP8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 IRF5Q13568 498 aa8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 BAATQ14032 418 aaPredicted RBP8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 EEPD1Q7L9B9 569 aa8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 MAML3Q96JK9 1138 aa8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 MTA3Q9BTC8 594 aa8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 RNF208Q9H0X6 261 aa8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 FAM217BQ9NTX9 383 aaPredicted RBP8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 PCDHA1Q9Y5I3 950 aa8.4□□□□□ -1.06
DEPDC1B-201ENST00000265036 POTEB2H3BUK9 544 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 STRNO43815 780 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 MYCNP04198 464 aaPredicted RBP8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 FDX1P10109 184 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 CCL5P13501 91 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 PTGS1P23219 599 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 CNGA1P29973 690 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 PRMT2P55345 433 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 ANAPC15P60006 121 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 RPS6P62753 249 aaKnown RBP8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 CACNB2Q08289 660 aaPredicted RBP8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 HEATR3Q7Z4Q2 680 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 CHST13Q8NET6 341 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 CLEC4DQ8WXI8 215 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 ARMC5Q96C12 935 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 FGD4Q96M96 766 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 TM6SF1Q9BZW5 370 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 RIOX1Q9H6W3 641 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 CYP39A1Q9NYL5 469 aa8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 SEC63Q9UGP8 760 aaKnown RBP8.4□□□□□ -1.07
DEPDC1B-201ENST00000265036 OPLAHO14841 1288 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 CALM1P0DP23 149 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 CALM2P0DP24 149 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 CALM3P0DP25 149 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 PDIA3P30101 505 aaKnown RBP8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 UBXN2AP68543 259 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 RNF207Q6ZRF8 634 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 NECAB1Q8N987 351 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 RRP36Q96EU6 259 aaKnown RBP8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 ZFP91Q96JP5 570 aaPredicted RBP8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 DEFB118Q96PH6 123 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 KIF2CQ99661 725 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 SPZ1Q9BXG8 430 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 AMNQ9BXJ7 453 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 UPF2Q9HAU5 1272 aaKnown RBP8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 FBXO40Q9UH90 709 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 TPCN1Q9ULQ1 816 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 FRMPD3Q5JV73 1810 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 COPB2P35606 906 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 TRPV1Q8NER1 839 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 PXYLP1Q8TE99 480 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 AGXT2Q9BYV1 514 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 COL20A1Q9P218 1284 aa8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 ZHX1Q9UKY1 873 aaPredicted RBP8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 V9GY48 417 aaPredicted RBP8.39□□□□□ -1.07
DEPDC1B-201ENST00000265036 DNAJC25-GNG10A0A024R161 153 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 SOWAHBA6NEL2 793 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 HOXC6P09630 235 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 XRCC5P13010 732 aaKnown RBP8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 ZNF792Q3KQV3 632 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 TYW1BQ6NUM6 668 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 FCHSD1Q86WN1 690 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms