RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 IFNAR1P17181 557 aa15.53■□□□□ 0.08
PDCD6-201ENST00000264933 SHCBP1Q8NEM2 672 aa15.53■□□□□ 0.08
PDCD6-201ENST00000264933 GTF3C6Q969F1 213 aa15.53■□□□□ 0.08
PDCD6-201ENST00000264933 SLKQ9H2G2 1235 aaPredicted RBP15.53■□□□□ 0.08
PDCD6-201ENST00000264933 GABRQQ9UN88 632 aa15.53■□□□□ 0.08
PDCD6-201ENST00000264933 hCG_1642624A0A1W2PR95 340 aa15.52■□□□□ 0.08
PDCD6-201ENST00000264933 ST18O60284 1047 aa15.52■□□□□ 0.08
PDCD6-201ENST00000264933 ERCC3P19447 782 aa15.52■□□□□ 0.08
PDCD6-201ENST00000264933 PKN1Q16512 942 aa15.52■□□□□ 0.08
PDCD6-201ENST00000264933 SNRNP48Q6IEG0 339 aaKnown RBP15.52■□□□□ 0.08
PDCD6-201ENST00000264933 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.52■□□□□ 0.083e-7■■■□□ 15.3
PDCD6-201ENST00000264933 ZSCAN31Q96LW9 406 aaPredicted RBP15.52■□□□□ 0.08
PDCD6-201ENST00000264933 TEX13BQ9BXU2 312 aa15.52■□□□□ 0.08
PDCD6-201ENST00000264933 RANBP2P49792 3224 aaKnown RBP15.51■□□□□ 0.07
PDCD6-201ENST00000264933 PNMA6FA0A0J9YX94 578 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 CCDC196A0A1B0GTZ2 297 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 PRPF3O43395 683 aaKnown RBP15.51■□□□□ 0.07
PDCD6-201ENST00000264933 PPFIA3O75145 1194 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 GRK4P32298 578 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 FCGRTP55899 365 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 PLS1Q14651 629 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 MUM1L1Q5H9M0 696 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 HOMER1Q86YM7 354 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 CLEC4DQ8WXI8 215 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 PHKBQ93100 1093 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 GJD2Q9UKL4 321 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 V9GY48 417 aaPredicted RBP15.51■□□□□ 0.07
PDCD6-201ENST00000264933 ZNF236Q9UL36 1845 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 CEP290O15078 2479 aa15.51■□□□□ 0.07
PDCD6-201ENST00000264933 OPLAHO14841 1288 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 DHX16O60231 1041 aaKnown RBP15.5■□□□□ 0.07
PDCD6-201ENST00000264933 SLC25A27O95847 323 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 FDPSP14324 419 aaKnown RBP15.5■□□□□ 0.07
PDCD6-201ENST00000264933 HOXD10P28358 340 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 GPR142Q7Z601 462 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 UBE2Q1Q7Z7E8 422 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 FBXO11Q86XK2 927 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 RAET1EQ8TD07 263 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 PIBF1Q8WXW3 757 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 USP6NLQ92738 828 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 SNX21Q969T3 373 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 COA7Q96BR5 231 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 RRP36Q96EU6 259 aaKnown RBP15.5■□□□□ 0.07
PDCD6-201ENST00000264933 TMX3Q96JJ7 454 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
PDCD6-201ENST00000264933 CCPG1Q9ULG6 757 aa15.5■□□□□ 0.07
PDCD6-201ENST00000264933 ALAS1P13196 640 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 PTPREP23469 700 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 MCM2P49736 904 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 CCNA1P78396 465 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 TKFCQ3LXA3 575 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 HABP4Q5JVS0 413 aaKnown RBP15.49■□□□□ 0.07
PDCD6-201ENST00000264933 MORN1Q5T089 497 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 TYW1BQ6NUM6 668 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 NCAPG2Q86XI2 1143 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 CCDC83Q8IWF9 413 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 NSUN7Q8NE18 718 aaKnown RBP15.49■□□□□ 0.07
PDCD6-201ENST00000264933 TBC1D5Q92609 795 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 TRERF1Q96PN7 1200 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 AMNQ9BXJ7 453 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 RNF26Q9BY78 433 aaPredicted RBP15.49■□□□□ 0.07
PDCD6-201ENST00000264933 MROH8Q9H579 483 aa15.49■□□□□ 0.07
PDCD6-201ENST00000264933 SH2B1Q9NRF2 756 aaPredicted RBP15.49■□□□□ 0.07
PDCD6-201ENST00000264933 CTDP1Q9Y5B0 961 aaPredicted RBP15.49■□□□□ 0.07
PDCD6-201ENST00000264933 MCM3APO60318 1980 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 CCL5P13501 91 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 MAPK4P31152 587 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 SLC4A3P48751 1232 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 FLT3LGP49771 235 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 PFKFB3Q16875 520 aaPredicted RBP15.48■□□□□ 0.07
PDCD6-201ENST00000264933 USH1GQ495M9 461 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 PLEKHH3Q7Z736 793 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 CHST13Q8NET6 341 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 SMARCC2Q8TAQ2 1214 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 SLC26A6Q9BXS9 759 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 RNF146Q9NTX7 359 aa15.48■□□□□ 0.07
PDCD6-201ENST00000264933 ABCB11O95342 1321 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 NFIBO00712 420 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 JAK2O60674 1132 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 GJB1P08034 283 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 COPB2P35606 906 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 GJA8P48165 433 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 GHRHRQ02643 423 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 GRB14Q14449 540 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 WWC2Q6AWC2 1192 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 SLAIN1Q8ND83 568 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 AIFM3Q96NN9 605 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 HOMER2Q9NSB8 354 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 PCDHA1Q9Y5I3 950 aa15.47■□□□□ 0.07
PDCD6-201ENST00000264933 DNAJC25-GNG10A0A024R161 153 aa15.46■□□□□ 0.07
PDCD6-201ENST00000264933 TNPO2O14787 897 aaKnown RBP15.46■□□□□ 0.07
PDCD6-201ENST00000264933 ADAMTS3O15072 1205 aa15.46■□□□□ 0.07
PDCD6-201ENST00000264933 STRNO43815 780 aa15.46■□□□□ 0.07
PDCD6-201ENST00000264933 COBLO75128 1261 aa15.46■□□□□ 0.07
PDCD6-201ENST00000264933 ELNP15502 786 aa15.46■□□□□ 0.07
PDCD6-201ENST00000264933 SSRP1Q08945 709 aaKnown RBP15.46■□□□□ 0.07
PDCD6-201ENST00000264933 IRF5Q13568 498 aa15.46■□□□□ 0.07
PDCD6-201ENST00000264933 CUL4AQ13619 759 aa15.46■□□□□ 0.07
PDCD6-201ENST00000264933 RGS22Q8NE09 1264 aa15.46■□□□□ 0.07
PDCD6-201ENST00000264933 GPKOWQ92917 476 aaPredicted RBP eCLIP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms