RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 METTL14Q9HCE5 456 aaKnown RBP15.43■□□□□ 0.06
CDH3-201ENST00000264012 MYO1AQ9UBC5 1043 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 USTQ9Y2C2 406 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 RABGAP1Q9Y3P9 1069 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 IKBKBO14920 756 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 RXRBP28702 533 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 TRIM58Q8NG06 486 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 PGBD1Q96JS3 809 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 MINPP1Q9UNW1 487 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 PABPN1LA6NDY0 278 aaKnown RBP15.43■□□□□ 0.06
CDH3-201ENST00000264012 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 hCG_1984214I3L0E3 225 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 ZBTB16Q05516 673 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
CDH3-201ENST00000264012 GRAMD1CQ8IYS0 662 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 NBPF15Q8N660 670 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 ZNF713Q8N859 430 aaPredicted RBP15.43■□□□□ 0.06
CDH3-201ENST00000264012 COA7Q96BR5 231 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 GCFC2P16383 781 aaKnown RBP15.43■□□□□ 0.06
CDH3-201ENST00000264012 SMYD4Q8IYR2 804 aaPredicted RBP15.43■□□□□ 0.06
CDH3-201ENST00000264012 PCDHB6Q9Y5E3 794 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 NRKQ7Z2Y5 1582 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 COBLO75128 1261 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 NPR1P16066 1061 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 CDC25AP30304 524 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 POLR2FP61218 127 aaKnown RBP15.42■□□□□ 0.06
CDH3-201ENST00000264012 PABPC4Q13310 644 aaKnown RBP eCLIP15.42■□□□□ 0.06
CDH3-201ENST00000264012 LRCH2Q5VUJ6 765 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 GJA10Q969M2 543 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 ARHGAP27Q6ZUM4 889 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 TBC1D10CQ8IV04 446 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 COA1Q9GZY4 146 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 PI4KBQ9UBF8 816 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 ASIC3Q9UHC3 531 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 NRBP1Q9UHY1 535 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 MMP10P09238 476 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 BMP3P12645 472 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 PRDX5P30044 214 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 HPDP32754 393 aaPredicted RBP15.42■□□□□ 0.06
CDH3-201ENST00000264012 CDK8P49336 464 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 CCDC121Q6ZUS5 278 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 DGKHQ86XP1 1220 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 CNOT6LQ96LI5 555 aaKnown RBP15.42■□□□□ 0.06
CDH3-201ENST00000264012 TUBGCP2Q9BSJ2 902 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 HAUS4Q9H6D7 363 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 FAM169AQ9Y6X4 670 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 COL15A1P39059 1388 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 ABCC12Q96J65 1359 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 ABCB4P21439 1286 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 SULF1Q8IWU6 871 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 STAG1Q8WVM7 1258 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 SSX2IPQ9Y2D8 614 aa15.42■□□□□ 0.06
CDH3-201ENST00000264012 SRPRBQ9Y5M8 271 aaKnown RBP15.42■□□□□ 0.06
CDH3-201ENST00000264012 SORBS3O60504 671 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 RAD17O75943 681 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 LIG4P49917 911 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 SNX16P57768 344 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 PAK2Q13177 524 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 FAM170AA1A519 330 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 UBXN2AP68543 259 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 TAF12Q16514 161 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 RPGRIP1Q96KN7 1286 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 PYCARDQ9ULZ3 195 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 PPM1FP49593 454 aaPredicted RBP15.41■□□□□ 0.06
CDH3-201ENST00000264012 ODR4Q5SWX8 454 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 CELF1Q92879 486 aaKnown RBP15.41■□□□□ 0.06
CDH3-201ENST00000264012 FAM204AQ9H8W3 233 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 EPN1Q9Y6I3 576 aaPredicted RBP15.41■□□□□ 0.06
CDH3-201ENST00000264012 PLEKHA8P1O95397 391 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 AFAP1L1Q8TED9 768 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 NKIRAS1Q9NYS0 192 aa15.41■□□□□ 0.06
CDH3-201ENST00000264012 CASP14P31944 242 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 WHAMMP3Q1A5X7 153 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 DPY19L2Q6NUT2 758 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 METTL13Q8N6R0 699 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 DHTKD1Q96HY7 919 aaPredicted RBP15.4■□□□□ 0.06
CDH3-201ENST00000264012 MAN1B1Q9UKM7 699 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 AMFRQ9UKV5 643 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 MXRA7P84157 204 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 ARMCX5Q6P1M9 558 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 GADL1Q6ZQY3 521 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 KIAA1524Q8TCG1 905 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 GJB4Q9NTQ9 266 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 TRPC6Q9Y210 931 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 CRB1P82279 1406 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 N4BP1O75113 896 aaKnown RBP15.4■□□□□ 0.06
CDH3-201ENST00000264012 CDC25BP30305 580 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 TRIM28Q13263 835 aaKnown RBP15.4■□□□□ 0.06
CDH3-201ENST00000264012 CEP128Q6ZU80 1094 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 SND1Q7KZF4 910 aaKnown RBP eCLIP15.4■□□□□ 0.06
CDH3-201ENST00000264012 CCDC105Q8IYK2 499 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 CCDC127Q96BQ5 260 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 SAMD15Q9P1V8 674 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 PTPRMP28827 1452 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 PRPF6O94906 941 aaKnown RBP15.4■□□□□ 0.06
CDH3-201ENST00000264012 NT5C2P49902 561 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 FOXO4P98177 505 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 CCDC14Q49A88 953 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 ZBTB8OSQ8IWT0 167 aa15.4■□□□□ 0.06
CDH3-201ENST00000264012 BCL2L12Q9HB09 334 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms