RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 ABCB11O95342 1321 aa19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 K7ELQ4 463 aaPredicted RBP19.2■□□□□ 0.66
CHCHD3-201ENST00000262570 DTNBO60941 627 aa19.2■□□□□ 0.66
CHCHD3-201ENST00000262570 SCG2P13521 617 aa19.2■□□□□ 0.66
CHCHD3-201ENST00000262570 WDR78Q5VTH9 848 aa19.2■□□□□ 0.66
CHCHD3-201ENST00000262570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHCHD3-201ENST00000262570 CD99L2Q8TCZ2 262 aa19.2■□□□□ 0.66
CHCHD3-201ENST00000262570 CLEC4DQ8WXI8 215 aa19.2■□□□□ 0.66
CHCHD3-201ENST00000262570 COA7Q96BR5 231 aa19.2■□□□□ 0.66
CHCHD3-201ENST00000262570 TRIM47Q96LD4 638 aa19.2■□□□□ 0.66
CHCHD3-201ENST00000262570 ACAD9Q9H845 621 aa19.2■□□□□ 0.66
CHCHD3-201ENST00000262570 STK36Q9NRP7 1315 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 PTPDC1A2A3K4 754 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 STRNO43815 780 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 JAK2O60674 1132 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 ECM2O94769 699 aaPredicted RBP19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 DEXIO95424 95 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 FDPSP14324 419 aaKnown RBP19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 FCGRTP55899 365 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 CUL4AQ13619 759 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 MUM1L1Q5H9M0 696 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 WWC2Q6AWC2 1192 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 PLEKHH3Q7Z736 793 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 SMARCC2Q8TAQ2 1214 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 MRPL11Q9Y3B7 192 aaKnown RBP19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 SMCHD1A6NHR9 2005 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 hCG_1984214I3L0E3 225 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 TNPO2O14787 897 aaKnown RBP19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 LBX1P52954 281 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 HEATR3Q7Z4Q2 680 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 HSCBQ8IWL3 235 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 ZNF713Q8N859 430 aaPredicted RBP19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 GPKOWQ92917 476 aaPredicted RBP eCLIP19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 BARHL2Q9NY43 387 aa19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 ORC3Q9UBD5 711 aaPredicted RBP19.19■□□□□ 0.66
CHCHD3-201ENST00000262570 NFIBO00712 420 aa19.18■□□□□ 0.66
CHCHD3-201ENST00000262570 OPLAHO14841 1288 aa19.18■□□□□ 0.66
CHCHD3-201ENST00000262570 FCER1AP12319 257 aa19.18■□□□□ 0.66
CHCHD3-201ENST00000262570 PTPREP23469 700 aa19.18■□□□□ 0.66
CHCHD3-201ENST00000262570 TYW1BQ6NUM6 668 aa19.18■□□□□ 0.66
CHCHD3-201ENST00000262570 ABRAQ8N0Z2 381 aa19.18■□□□□ 0.66
CHCHD3-201ENST00000262570 CWC22Q9HCG8 908 aaKnown RBP19.18■□□□□ 0.66
CHCHD3-201ENST00000262570 IVNS1ABPQ9Y6Y0 642 aa19.18■□□□□ 0.66
CHCHD3-201ENST00000262570 STXBP3O00186 592 aa19.17■□□□□ 0.66
CHCHD3-201ENST00000262570 GRB14Q14449 540 aa19.17■□□□□ 0.66
CHCHD3-201ENST00000262570 RGS22Q8NE09 1264 aa19.17■□□□□ 0.66
CHCHD3-201ENST00000262570 DDX11Q96FC9 970 aa19.17■□□□□ 0.66
CHCHD3-201ENST00000262570 GJD2Q9UKL4 321 aa19.17■□□□□ 0.66
CHCHD3-201ENST00000262570 MYH6P13533 1939 aa19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 SLC15A5A6NIM6 579 aa19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 GNRH1P01148 92 aa19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 HMGN5P82970 282 aaKnown RBP19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 KCTD2Q14681 263 aa19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 ARHGEF6Q15052 776 aa19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 MORN1Q5T089 497 aa19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 ANKRD35Q8N283 1001 aa19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 MMP19Q99542 508 aa19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 MAF1Q9H063 256 aa19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 A1CFQ9NQ94 594 aaKnown RBP19.16■□□□□ 0.66
CHCHD3-201ENST00000262570 NAPAP54920 295 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 PPP1R18Q6NYC8 613 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 MCF2L2Q86YR7 1114 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 WASF1Q92558 559 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 TBC1D5Q92609 795 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 AIFM3Q96NN9 605 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 SH3GLB2Q9NR46 395 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 ADORA2AP29274 412 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 GHRHRQ02643 423 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 NSMFQ6X4W1 530 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 USP6NLQ92738 828 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 SHISA4Q96DD7 197 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 NUDT12Q9BQG2 462 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 CYP39A1Q9NYL5 469 aa19.15■□□□□ 0.66
CHCHD3-201ENST00000262570 PFASO15067 1338 aa19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 HOXD10P28358 340 aa19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 RPS6P62753 249 aaKnown RBP19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 BAATQ14032 418 aaPredicted RBP19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 RNF207Q6ZRF8 634 aa19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 SAMD3Q8N6K7 520 aa19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 CCDC12Q8WUD4 166 aaPredicted RBP19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 SOCS4Q8WXH5 440 aa19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 INTS4Q96HW7 963 aaKnown RBP19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 PSTPIP2Q9H939 334 aa19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 MAP3K20Q9NYL2 800 aaKnown RBP19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 VPS54Q9P1Q0 977 aa19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 SRRDQ9UH36 339 aa19.14■□□□□ 0.65
CHCHD3-201ENST00000262570 ZSWIM8A7E2V4 1837 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 DNAJC25-GNG10A0A024R161 153 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 ESYT2A0FGR8 921 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 COBLO75128 1261 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 CFBP00751 764 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 PRKCZQ05513 592 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 OTOP1Q7RTM1 612 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 DOCK3Q8IZD9 2030 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 FAM177A1Q8N128 213 aaPredicted RBP19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 ALG1Q9BT22 464 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 ZMYND12Q9H0C1 365 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 GABRQQ9UN88 632 aa19.13■□□□□ 0.65
CHCHD3-201ENST00000262570 MGAMO43451 1857 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms