RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
VMP1-201ENST00000262291 NT5DC1Q5TFE4 455 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 CCDC84Q86UT8 332 aaPredicted RBP15.35■□□□□ 0.05
VMP1-201ENST00000262291 LRRC8AQ8IWT6 810 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 USP17L15C9J2P7 530 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 USP17L13C9JLJ4 530 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 USP17L11C9JVI0 530 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 USP17L18D6R9N7 530 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 USP17L22D6RA61 530 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 USP17L17D6RBQ6 530 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 USP17L19D6RCP7 530 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 USP17L20D6RJB6 530 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 SLC37A4O43826 429 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 NEMFO60524 1076 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 FKBP1AP62942 108 aaKnown RBP15.35■□□□□ 0.05
VMP1-201ENST00000262291 USP17L24Q0WX57 530 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 DLGAP5Q15398 846 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 RBM26Q5T8P6 1007 aaKnown RBP15.35■□□□□ 0.05
VMP1-201ENST00000262291 CC2D2BQ6DHV5 1058 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 GALNT17Q6IS24 598 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 USP17L6PQ6QN14 398 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 CCDC17Q96LX7 622 aa15.35■□□□□ 0.05
VMP1-201ENST00000262291 ZNF646O15015 1829 aaPredicted RBP15.34■□□□□ 0.05
VMP1-201ENST00000262291 PNMA6FA0A0J9YX94 578 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 EDIL3O43854 480 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 TPM3P06753 285 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 UBA7P41226 1012 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 ZYXQ15942 572 aaKnown RBP15.34■□□□□ 0.05
VMP1-201ENST00000262291 CREBRFQ8IUR6 639 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 RTKN2Q8IZC4 609 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 MRIQ9BWK5 157 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 TMEM39BQ9GZU3 492 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 RGPD3A6NKT7 1758 aaPredicted RBP15.34■□□□□ 0.05
VMP1-201ENST00000262291 RGPD4Q7Z3J3 1758 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 A0A1W2PRG0 241 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 SPDYE2BA6NHP3 402 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 F5H6K3 240 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 OR52Z1P0C646 297 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 SPDYE6P0CI01 402 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 LONP1P36776 959 aaKnown RBP15.34■□□□□ 0.05
VMP1-201ENST00000262291 ECE1P42892 770 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 IRX5P78411 483 aaPredicted RBP15.34■□□□□ 0.05
VMP1-201ENST00000262291 KLRC3Q07444 240 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 QRICH1Q2TAL8 776 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 USH1GQ495M9 461 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 ARL6IP4Q66PJ3 421 aaKnown RBP15.34■□□□□ 0.05
VMP1-201ENST00000262291 KANSL2Q9H9L4 492 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.34■□□□□ 0.05
VMP1-201ENST00000262291 ZNF70Q9UC06 446 aaPredicted RBP15.34■□□□□ 0.05
VMP1-201ENST00000262291 GDAQ9Y2T3 454 aa15.34■□□□□ 0.05
VMP1-201ENST00000262291 TXLNAP40222 546 aa15.33■□□□□ 0.05
VMP1-201ENST00000262291 NAALADL2Q58DX5 795 aa15.33■□□□□ 0.05
VMP1-201ENST00000262291 RRAGBQ5VZM2 374 aa15.33■□□□□ 0.05
VMP1-201ENST00000262291 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.05
VMP1-201ENST00000262291 MLKLQ8NB16 471 aa15.33■□□□□ 0.05
VMP1-201ENST00000262291 SPATA20Q8TB22 786 aa15.33■□□□□ 0.05
VMP1-201ENST00000262291 CTNND2Q9UQB3 1225 aa15.33■□□□□ 0.05
VMP1-201ENST00000262291 USP27XA6NNY8 438 aa15.33■□□□□ 0.04
VMP1-201ENST00000262291 SKILP12757 684 aa15.33■□□□□ 0.04
VMP1-201ENST00000262291 ARMCX5Q6P1M9 558 aa15.33■□□□□ 0.04
VMP1-201ENST00000262291 ACER1Q8TDN7 264 aa15.33■□□□□ 0.04
VMP1-201ENST00000262291 DISC1Q9NRI5 854 aa15.33■□□□□ 0.04
VMP1-201ENST00000262291 INTS13Q9NVM9 706 aa15.33■□□□□ 0.04
VMP1-201ENST00000262291 TRMT1Q9NXH9 659 aaKnown RBP15.33■□□□□ 0.04
VMP1-201ENST00000262291 ZBTB5O15062 677 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 NDUFB10O96000 172 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 NAA30Q147X3 362 aaPredicted RBP15.32■□□□□ 0.04
VMP1-201ENST00000262291 ELOA2Q8IYF1 753 aaPredicted RBP15.32■□□□□ 0.04
VMP1-201ENST00000262291 OGFOD1Q8N543 542 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 C16orf45Q96MC5 204 aaPredicted RBP15.32■□□□□ 0.04
VMP1-201ENST00000262291 TMOD2Q9NZR1 351 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 MYO3BQ8WXR4 1341 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 PLCG1P19174 1290 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 SMARCA1P28370 1054 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 CDC37Q16543 378 aaPredicted RBP15.32■□□□□ 0.04
VMP1-201ENST00000262291 NBPF9Q3BBW0 867 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 KIAA1755Q5JYT7 1200 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 PAXIP1Q6ZW49 1069 aaPredicted RBP15.32■□□□□ 0.04
VMP1-201ENST00000262291 NIM1KQ8IY84 436 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 PCDHA1Q9Y5I3 950 aa15.32■□□□□ 0.04
VMP1-201ENST00000262291 MORC2Q9Y6X9 1032 aaPredicted RBP15.32■□□□□ 0.04
VMP1-201ENST00000262291 EGFRP00533 1210 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 VIL1P09327 827 aaKnown RBP15.31■□□□□ 0.04
VMP1-201ENST00000262291 CXCL9Q07325 125 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 GPATCH4Q5T3I0 446 aaKnown RBP15.31■□□□□ 0.04
VMP1-201ENST00000262291 TMEM179Q6ZVK1 233 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 CABP7Q86V35 215 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 ANKRD7Q92527 254 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 POTEMA6NI47 508 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 PPP1R3GB7ZBB8 358 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 CCZ1BP86790 482 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 CCZ1P86791 482 aaPredicted RBP15.31■□□□□ 0.04
VMP1-201ENST00000262291 CCDC34Q96HJ3 373 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 GMLQ99445 158 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 SPTLC3Q9NUV7 552 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 NYAP2Q9P242 653 aa15.31■□□□□ 0.04
VMP1-201ENST00000262291 CALCRLQ16602 461 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 TAF3Q5VWG9 929 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 EEF2KMTQ96G04 330 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms