RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 RASGRP4Q8TDF6 673 aa31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 TXNRD2Q9NNW7 524 aa31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 BTBD18B2RXH4 712 aa31.58■■■□□ 2.65
SMARCD3-201ENST00000262188 ICAM1P05362 532 aa31.58■■■□□ 2.65
SMARCD3-201ENST00000262188 PABPC4Q13310 644 aaKnown RBP eCLIP31.58■■■□□ 2.65
SMARCD3-201ENST00000262188 NOM1Q5C9Z4 860 aaKnown RBP31.58■■■□□ 2.65
SMARCD3-201ENST00000262188 ZNF214Q9UL59 606 aaPredicted RBP31.58■■■□□ 2.65
SMARCD3-201ENST00000262188 CIZ1Q9ULV3 898 aaPredicted RBP31.58■■■□□ 2.65
SMARCD3-201ENST00000262188 SMCO2A6NFE2 343 aa31.57■■■□□ 2.65
SMARCD3-201ENST00000262188 XBP1P17861 261 aa31.57■■■□□ 2.65
SMARCD3-201ENST00000262188 FAM173BQ6P4H8 233 aa31.57■■■□□ 2.65
SMARCD3-201ENST00000262188 OPLAHO14841 1288 aa31.57■■■□□ 2.64
SMARCD3-201ENST00000262188 ALAS1P13196 640 aa31.57■■■□□ 2.64
SMARCD3-201ENST00000262188 LBX2Q6XYB7 198 aa31.57■■■□□ 2.64
SMARCD3-201ENST00000262188 DIS3L2Q8IYB7 885 aaKnown RBP31.57■■■□□ 2.64
SMARCD3-201ENST00000262188 MYPNQ86TC9 1320 aa31.56■■■□□ 2.64
SMARCD3-201ENST00000262188 WDR33Q9C0J8 1336 aaKnown RBP31.56■■■□□ 2.64
SMARCD3-201ENST00000262188 CNMDO75829 334 aa31.56■■■□□ 2.64
SMARCD3-201ENST00000262188 SNRNP48Q6IEG0 339 aaKnown RBP31.56■■■□□ 2.64
SMARCD3-201ENST00000262188 TBC1D5Q92609 795 aa31.56■■■□□ 2.64
SMARCD3-201ENST00000262188 R3HDMLQ9H3Y0 253 aa31.56■■■□□ 2.64
SMARCD3-201ENST00000262188 SH3GLB2Q9NR46 395 aa31.56■■■□□ 2.64
SMARCD3-201ENST00000262188 RBPJLQ9UBG7 517 aa31.56■■■□□ 2.64
SMARCD3-201ENST00000262188 FSD2A1L4K1 749 aa31.55■■■□□ 2.64
SMARCD3-201ENST00000262188 PDIA4P13667 645 aaKnown RBP31.55■■■□□ 2.64
SMARCD3-201ENST00000262188 NUCB2P80303 420 aa31.55■■■□□ 2.64
SMARCD3-201ENST00000262188 UBE2SQ16763 222 aa31.55■■■□□ 2.64
SMARCD3-201ENST00000262188 MUM1L1Q5H9M0 696 aa31.55■■■□□ 2.64
SMARCD3-201ENST00000262188 SMCR8Q8TEV9 937 aaPredicted RBP31.55■■■□□ 2.64
SMARCD3-201ENST00000262188 A0A0G2JMZ2 1700 aa31.55■■■□□ 2.64
SMARCD3-201ENST00000262188 FAM205CA6NFA0 338 aa31.54■■■□□ 2.64
SMARCD3-201ENST00000262188 F13A1P00488 732 aa31.54■■■□□ 2.64
SMARCD3-201ENST00000262188 TERF1P54274 439 aa31.54■■■□□ 2.64
SMARCD3-201ENST00000262188 IFNL1Q8IU54 200 aa31.54■■■□□ 2.64
SMARCD3-201ENST00000262188 CCDC148Q8NFR7 591 aa31.54■■■□□ 2.64
SMARCD3-201ENST00000262188 ZMYND12Q9H0C1 365 aa31.54■■■□□ 2.64
SMARCD3-201ENST00000262188 NCLP19338 710 aaKnown RBP31.54■■■□□ 2.64
SMARCD3-201ENST00000262188 RESTQ13127 1097 aa31.54■■■□□ 2.64
SMARCD3-201ENST00000262188 EARS2Q5JPH6 523 aaKnown RBP31.54■■■□□ 2.64
SMARCD3-201ENST00000262188 TMEM260Q9NX78 707 aa31.54■■■□□ 2.64
SMARCD3-201ENST00000262188 hCG_1984214I3L0E3 225 aa31.53■■■□□ 2.64
SMARCD3-201ENST00000262188 Q3C1V9 767 aa31.53■■■□□ 2.64
SMARCD3-201ENST00000262188 ZNF713Q8N859 430 aaPredicted RBP31.53■■■□□ 2.64
SMARCD3-201ENST00000262188 PNMA3Q9UL41 463 aa31.53■■■□□ 2.64
SMARCD3-201ENST00000262188 PCDHA4Q9UN74 947 aa31.53■■■□□ 2.64
SMARCD3-201ENST00000262188 NFIBO00712 420 aa31.52■■■□□ 2.64
SMARCD3-201ENST00000262188 USP17L6PQ6QN14 398 aa31.52■■■□□ 2.64
SMARCD3-201ENST00000262188 PGBD1Q96JS3 809 aa31.52■■■□□ 2.64
SMARCD3-201ENST00000262188 BIN2Q9UBW5 565 aaPredicted RBP31.52■■■□□ 2.64
SMARCD3-201ENST00000262188 SLC45A1Q9Y2W3 748 aa31.52■■■□□ 2.64
SMARCD3-201ENST00000262188 KRT2P35908 639 aa31.52■■■□□ 2.64
SMARCD3-201ENST00000262188 ADCY7P51828 1080 aa31.52■■■□□ 2.64
SMARCD3-201ENST00000262188 BLIDQ8IZY5 108 aa31.52■■■□□ 2.64
SMARCD3-201ENST00000262188 CCDC12Q8WUD4 166 aaPredicted RBP31.52■■■□□ 2.64
SMARCD3-201ENST00000262188 PSTPIP2Q9H939 334 aa31.52■■■□□ 2.64
SMARCD3-201ENST00000262188 HOXA13P31271 388 aaPredicted RBP31.51■■■□□ 2.63
SMARCD3-201ENST00000262188 STAT3P40763 770 aa31.51■■■□□ 2.63
SMARCD3-201ENST00000262188 VEGFBP49765 207 aa31.51■■■□□ 2.63
SMARCD3-201ENST00000262188 ANKRD13CQ8N6S4 541 aa31.51■■■□□ 2.63
SMARCD3-201ENST00000262188 CLEC4DQ8WXI8 215 aa31.51■■■□□ 2.63
SMARCD3-201ENST00000262188 C6orf50Q9HD87 102 aa31.51■■■□□ 2.63
SMARCD3-201ENST00000262188 GOLGA6L3A6NEY3 463 aa31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 FDX1P10109 184 aa31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 GNL2Q13823 731 aaKnown RBP31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 SAFBQ15424 915 aaKnown RBP eCLIP31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 TRERF1Q96PN7 1200 aa31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 TEX13BQ9BXU2 312 aa31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 NOGQ13253 232 aa31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 JAKMIP3Q5VZ66 844 aa31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 PPP1R18Q6NYC8 613 aa31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 TNPO1Q92973 898 aaKnown RBP31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 SPATC1LQ9H0A9 340 aa31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 RIC8AQ9NPQ8 531 aa31.5■■■□□ 2.63
SMARCD3-201ENST00000262188 SREBF2Q12772 1141 aa31.49■■■□□ 2.63
SMARCD3-201ENST00000262188 RNF146Q9NTX7 359 aa31.49■■■□□ 2.63
SMARCD3-201ENST00000262188 PCDHA6Q9UN73 950 aa31.49■■■□□ 2.63
SMARCD3-201ENST00000262188 PCDHA8Q9Y5H6 950 aa31.49■■■□□ 2.63
SMARCD3-201ENST00000262188 ABCB11O95342 1321 aa31.49■■■□□ 2.63
SMARCD3-201ENST00000262188 ECM2O94769 699 aaPredicted RBP31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 CFBP00751 764 aa31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 CALML3P27482 149 aa31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 TAF1CQ15572 869 aaPredicted RBP31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 MB21D1Q8N884 522 aa31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 TNFRSF25Q93038 417 aa31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 PARK7Q99497 189 aaKnown RBP31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 MRPL11Q9Y3B7 192 aaKnown RBP31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 ESYT2A0FGR8 921 aa31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 M0R2N6 131 aa31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 OAZ1P54368 228 aa31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 SMAP1Q8IYB5 467 aaPredicted RBP31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 CUL5Q93034 780 aa31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 MOV10L1Q9BXT6 1211 aaKnown RBP31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 CPA4Q9UI42 421 aa31.48■■■□□ 2.63
SMARCD3-201ENST00000262188 MEIS2O14770 477 aa31.47■■■□□ 2.63
SMARCD3-201ENST00000262188 ATP2A1O14983 1001 aa31.47■■■□□ 2.63
SMARCD3-201ENST00000262188 U2AF2P26368 475 aaKnown RBP eCLIP31.47■■■□□ 2.63
SMARCD3-201ENST00000262188 TM4SF4P48230 202 aa31.47■■■□□ 2.63
SMARCD3-201ENST00000262188 GNA11P29992 359 aa31.47■■■□□ 2.63
SMARCD3-201ENST00000262188 INHBEP58166 350 aa31.47■■■□□ 2.63
SMARCD3-201ENST00000262188 DAGLBQ8NCG7 672 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms