RNA–Protein interactions for RNA: ENST00000262101.9

MSR1-201, Transcript of macrophage scavenger receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSR1, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-201ENST00000262101 CHST13Q8NET6 341 aa16.9■□□□□ 0.3
MSR1-201ENST00000262101 CLEC4DQ8WXI8 215 aa16.9■□□□□ 0.3
MSR1-201ENST00000262101 TBC1D5Q92609 795 aa16.9■□□□□ 0.3
MSR1-201ENST00000262101 DDX11Q96FC9 970 aa16.9■□□□□ 0.3
MSR1-201ENST00000262101 ACAD9Q9H845 621 aa16.9■□□□□ 0.3
MSR1-201ENST00000262101 A1CFQ9NQ94 594 aaKnown RBP16.9■□□□□ 0.3
MSR1-201ENST00000262101 BIN2Q9UBW5 565 aaPredicted RBP16.9■□□□□ 0.3
MSR1-201ENST00000262101 GOLGA8AA7E2F4 631 aa16.89■□□□□ 0.29
MSR1-201ENST00000262101 XRCC5P13010 732 aaKnown RBP16.89■□□□□ 0.29
MSR1-201ENST00000262101 EVCP57679 992 aa16.89■□□□□ 0.29
MSR1-201ENST00000262101 RTN1Q16799 776 aa16.89■□□□□ 0.29
MSR1-201ENST00000262101 TMTC3Q6ZXV5 915 aa16.89■□□□□ 0.29
MSR1-201ENST00000262101 ABRAQ8N0Z2 381 aa16.89■□□□□ 0.29
MSR1-201ENST00000262101 NCOA5Q9HCD5 579 aaKnown RBP16.89■□□□□ 0.29
MSR1-201ENST00000262101 DTNBO60941 627 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
MSR1-201ENST00000262101 AK2P54819 239 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 CNTN2Q02246 1040 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 MTFR1Q15390 333 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 NOL8Q76FK4 1167 aaKnown RBP16.88■□□□□ 0.29
MSR1-201ENST00000262101 FBXO11Q86XK2 927 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 PXYLP1Q8TE99 480 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 DDX49Q9Y6V7 483 aaKnown RBP16.88■□□□□ 0.29
MSR1-201ENST00000262101 HOXC6P09630 235 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 COPB2P35606 906 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 RBM25P49756 843 aaKnown RBP16.88■□□□□ 0.29
MSR1-201ENST00000262101 FUT2Q10981 343 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 STK3Q13188 491 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 APBA2Q99767 749 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 SPZ1Q9BXG8 430 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 FBXO40Q9UH90 709 aa16.88■□□□□ 0.29
MSR1-201ENST00000262101 DNAJC25-GNG10A0A024R161 153 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 GNAQP50148 359 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 ZNF792Q3KQV3 632 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 SLAIN1Q8ND83 568 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 ZNF333Q96JL9 665 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 AMNQ9BXJ7 453 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 CYP39A1Q9NYL5 469 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 TPCN1Q9ULQ1 816 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 PCDHA1Q9Y5I3 950 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 PNMA6FA0A0J9YX94 578 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 CCDC85CA6NKD9 419 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 INHAP05111 366 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 CYP2C19P33261 490 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 BAATQ14032 418 aaPredicted RBP16.87■□□□□ 0.29
MSR1-201ENST00000262101 TKFCQ3LXA3 575 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 MAML3Q96JK9 1138 aa16.87■□□□□ 0.29
MSR1-201ENST00000262101 ZNFX1Q9P2E3 1918 aaKnown RBP16.87■□□□□ 0.29
MSR1-201ENST00000262101 OPLAHO14841 1288 aa16.86■□□□□ 0.29
MSR1-201ENST00000262101 SMARCA1P28370 1054 aa16.86■□□□□ 0.29
MSR1-201ENST00000262101 ARMC5Q96C12 935 aa16.86■□□□□ 0.29
MSR1-201ENST00000262101 FGD4Q96M96 766 aa16.86■□□□□ 0.29
MSR1-201ENST00000262101 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
MSR1-201ENST00000262101 RBM28Q9NW13 759 aaKnown RBP16.86■□□□□ 0.29
MSR1-201ENST00000262101 V9GY48 417 aaPredicted RBP16.86■□□□□ 0.29
MSR1-201ENST00000262101 PTPDC1A2A3K4 754 aa16.85■□□□□ 0.29
MSR1-201ENST00000262101 PRAMEF19Q5SWL8 479 aa16.85■□□□□ 0.29
MSR1-201ENST00000262101 RRP36Q96EU6 259 aaKnown RBP16.85■□□□□ 0.29
MSR1-201ENST00000262101 DNAH12Q6ZR08 3092 aa16.85■□□□□ 0.29
MSR1-201ENST00000262101 IGHA2P01877 340 aa16.85■□□□□ 0.29
MSR1-201ENST00000262101 CACNB2Q08289 660 aaPredicted RBP16.85■□□□□ 0.29
MSR1-201ENST00000262101 SLC30A10Q6XR72 485 aa16.85■□□□□ 0.29
MSR1-201ENST00000262101 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.85■□□□□ 0.29
MSR1-201ENST00000262101 PHKBQ93100 1093 aa16.85■□□□□ 0.29
MSR1-201ENST00000262101 ZNF274Q96GC6 653 aaPredicted RBP16.85■□□□□ 0.29
MSR1-201ENST00000262101 ALDH8A1Q9H2A2 487 aaPredicted RBP16.85■□□□□ 0.29
MSR1-201ENST00000262101 UPF2Q9HAU5 1272 aaKnown RBP16.85■□□□□ 0.29
MSR1-201ENST00000262101 ASTN1O14525 1302 aa16.85■□□□□ 0.29
MSR1-201ENST00000262101 SOWAHBA6NEL2 793 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 HMGCRP04035 888 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 CALML3P27482 149 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 RCAN1P53805 252 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 RPS6P62753 249 aaKnown RBP16.84■□□□□ 0.29
MSR1-201ENST00000262101 NTRK3Q16288 839 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 TBC1D32Q96NH3 1257 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 UNC93B1Q9H1C4 597 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 CNTNAP5Q8WYK1 1306 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 POTEB2H3BUK9 544 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 LARGE1O95461 756 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 RNF207Q6ZRF8 634 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 ABCB11O95342 1321 aa16.84■□□□□ 0.29
MSR1-201ENST00000262101 KIAA0100Q14667 2235 aaKnown RBP16.83■□□□□ 0.29
MSR1-201ENST00000262101 CAPN15O75808 1086 aa16.83■□□□□ 0.28
MSR1-201ENST00000262101 PRKAR2AP13861 404 aaKnown RBP16.83■□□□□ 0.28
MSR1-201ENST00000262101 SCRN1Q12765 414 aa16.83■□□□□ 0.28
MSR1-201ENST00000262101 ME3Q16798 604 aa16.83■□□□□ 0.28
MSR1-201ENST00000262101 GPKOWQ92917 476 aaPredicted RBP eCLIP16.83■□□□□ 0.28
MSR1-201ENST00000262101 SLC5A4Q9NY91 659 aa16.83■□□□□ 0.28
MSR1-201ENST00000262101 SEC63Q9UGP8 760 aaKnown RBP16.83■□□□□ 0.28
MSR1-201ENST00000262101 CFBP00751 764 aa16.82■□□□□ 0.28
MSR1-201ENST00000262101 NECAB1Q8N987 351 aa16.82■□□□□ 0.28
MSR1-201ENST00000262101 TINF2Q9BSI4 451 aa16.82■□□□□ 0.28
MSR1-201ENST00000262101 RNF208Q9H0X6 261 aa16.82■□□□□ 0.28
MSR1-201ENST00000262101 COL20A1Q9P218 1284 aa16.82■□□□□ 0.28
MSR1-201ENST00000262101 DIS3Q9Y2L1 958 aaKnown RBP16.82■□□□□ 0.28
MSR1-201ENST00000262101 MRPL11Q9Y3B7 192 aaKnown RBP16.82■□□□□ 0.28
MSR1-201ENST00000262101 MYH6P13533 1939 aa16.82■□□□□ 0.28
MSR1-201ENST00000262101 PFASO15067 1338 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms