RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MSL3Q8N5Y2 521 aaKnown RBP15.66■□□□□ 0.1
SGCA-201ENST00000262018 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.66■□□□□ 0.1
SGCA-201ENST00000262018 UPF3AQ9H1J1 476 aaKnown RBP15.66■□□□□ 0.1
SGCA-201ENST00000262018 GABPAQ06546 454 aa15.65■□□□□ 0.1
SGCA-201ENST00000262018 ACVR2BQ13705 512 aa15.65■□□□□ 0.1
SGCA-201ENST00000262018 LRRFIP1Q32MZ4 808 aaKnown RBP15.65■□□□□ 0.1
SGCA-201ENST00000262018 CLEC10AQ8IUN9 316 aa15.65■□□□□ 0.1
SGCA-201ENST00000262018 KCNB2Q92953 911 aa15.65■□□□□ 0.1
SGCA-201ENST00000262018 DDX11Q96FC9 970 aa15.65■□□□□ 0.1
SGCA-201ENST00000262018 FBXL18Q96ME1 805 aa15.65■□□□□ 0.1
SGCA-201ENST00000262018 NOC4LQ9BVI4 516 aaKnown RBP15.65■□□□□ 0.1
SGCA-201ENST00000262018 WNT8AQ9H1J5 351 aa15.65■□□□□ 0.1
SGCA-201ENST00000262018 ARHGEF10LQ9HCE6 1279 aa15.65■□□□□ 0.1
SGCA-201ENST00000262018 HELLSQ9NRZ9 838 aa15.65■□□□□ 0.1
SGCA-201ENST00000262018 FBXO28Q9NVF7 368 aa15.65■□□□□ 0.1
SGCA-201ENST00000262018 MYO5AQ9Y4I1 1855 aaKnown RBP15.65■□□□□ 0.1
SGCA-201ENST00000262018 TRANK1O15050 2925 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 WDR46O15213 610 aaKnown RBP15.64■□□□□ 0.09
SGCA-201ENST00000262018 RNF113AO15541 343 aaKnown RBP15.64■□□□□ 0.09
SGCA-201ENST00000262018 COPB2P35606 906 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 BEX3Q00994 111 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 EVX2Q03828 476 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 TTLL4Q14679 1199 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 CCDC144BQ3MJ40 725 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 MCMDC2Q4G0Z9 681 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 ZMYM1Q5SVZ6 1142 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 MAMDC4Q6UXC1 1216 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 TMEM179Q6ZVK1 233 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 GJD3Q8N144 294 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 MAGEB6Q8N7X4 407 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 MAP4K1Q92918 833 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 SCLYQ96I15 445 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 VCPKMTQ9H867 229 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 ADAMTS5Q9UNA0 930 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 TMX2Q9Y320 296 aa15.64■□□□□ 0.09
SGCA-201ENST00000262018 VWA5AO00534 786 aa15.63■□□□□ 0.09
SGCA-201ENST00000262018 CD2BP2O95400 341 aaKnown RBP15.63■□□□□ 0.09
SGCA-201ENST00000262018 ZFYP08048 801 aaPredicted RBP15.63■□□□□ 0.09
SGCA-201ENST00000262018 SSTR3P32745 418 aaPredicted RBP15.63■□□□□ 0.09
SGCA-201ENST00000262018 GRB10Q13322 594 aa15.63■□□□□ 0.09
SGCA-201ENST00000262018 NECTIN1Q15223 517 aa15.63■□□□□ 0.09
SGCA-201ENST00000262018 SLC9C2Q5TAH2 1124 aa15.63■□□□□ 0.09
SGCA-201ENST00000262018 ZSCAN25Q6NSZ9 544 aa15.63■□□□□ 0.09
SGCA-201ENST00000262018 CXCL17Q6UXB2 119 aa15.63■□□□□ 0.09
SGCA-201ENST00000262018 ZNF589Q86UQ0 364 aaPredicted RBP15.63■□□□□ 0.09
SGCA-201ENST00000262018 SIAH1Q8IUQ4 282 aa15.63■□□□□ 0.09
SGCA-201ENST00000262018 TRPV6Q9H1D0 765 aa15.63■□□□□ 0.09
SGCA-201ENST00000262018 SH2D4AQ9H788 454 aa15.63■□□□□ 0.09
SGCA-201ENST00000262018 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.63■□□□□ 0.09
SGCA-201ENST00000262018 ZNF214Q9UL59 606 aaPredicted RBP15.63■□□□□ 0.09
SGCA-201ENST00000262018 COL11A1P12107 1806 aaPredicted RBP15.63■□□□□ 0.09
SGCA-201ENST00000262018 K7ELQ4 463 aaPredicted RBP15.62■□□□□ 0.09
SGCA-201ENST00000262018 CTAGE5O15320 804 aa15.62■□□□□ 0.09
SGCA-201ENST00000262018 ST18O60284 1047 aa15.62■□□□□ 0.09
SGCA-201ENST00000262018 PDE6AP16499 860 aa15.62■□□□□ 0.09
SGCA-201ENST00000262018 TAP1Q03518 808 aa15.62■□□□□ 0.09
SGCA-201ENST00000262018 ICA1Q05084 483 aa15.62■□□□□ 0.09
SGCA-201ENST00000262018 ITGA7Q13683 1181 aa15.62■□□□□ 0.09
SGCA-201ENST00000262018 SLC43A3Q8NBI5 491 aa15.62■□□□□ 0.09
SGCA-201ENST00000262018 VWCEQ96DN2 955 aa15.62■□□□□ 0.09
SGCA-201ENST00000262018 SNX14Q9Y5W7 946 aa15.62■□□□□ 0.09
SGCA-201ENST00000262018 ARHGEF15O94989 841 aa15.61■□□□□ 0.09
SGCA-201ENST00000262018 CHGBP05060 677 aa15.61■□□□□ 0.09
SGCA-201ENST00000262018 ALADP13716 330 aa15.61■□□□□ 0.09
SGCA-201ENST00000262018 ADD2P35612 726 aa15.61■□□□□ 0.09
SGCA-201ENST00000262018 FAM178BQ8IXR5 827 aa15.61■□□□□ 0.09
SGCA-201ENST00000262018 ABHD16BQ9H3Z7 469 aa15.61■□□□□ 0.09
SGCA-201ENST00000262018 MCM9Q9NXL9 1143 aa15.61■□□□□ 0.09
SGCA-201ENST00000262018 PPP1R9AQ9ULJ8 1098 aa15.61■□□□□ 0.09
SGCA-201ENST00000262018 RBM8AQ9Y5S9 174 aaKnown RBP15.61■□□□□ 0.09
SGCA-201ENST00000262018 BRWD1Q9NSI6 2320 aa15.61■□□□□ 0.09
SGCA-201ENST00000262018 B4GALT4O60513 344 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 UBE3CQ15386 1083 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 NOL8Q76FK4 1167 aaKnown RBP15.6■□□□□ 0.09
SGCA-201ENST00000262018 DEFB128Q7Z7B8 93 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 REPS2Q8NFH8 660 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 SEC62Q99442 399 aaKnown RBP15.6■□□□□ 0.09
SGCA-201ENST00000262018 PARP14Q460N5 1801 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 ZNF532Q9HCE3 1301 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 DNAJC25-GNG10A0A024R161 153 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 TCRBV5S4A2TA0A5A2 114 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 RAD21O60216 631 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 CABYRO75952 493 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 AKR1B1P15121 316 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 MCM2P49736 904 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 ZNF467Q7Z7K2 595 aaPredicted RBP15.6■□□□□ 0.09
SGCA-201ENST00000262018 AGBL1Q96MI9 1066 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 KCNH6Q9H252 994 aa15.6■□□□□ 0.09
SGCA-201ENST00000262018 GRIN2DO15399 1336 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 KIF28PB7ZC32 967 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 LPXNO60711 386 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 PFKMP08237 780 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 CYP2D6P10635 497 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 NEK4P51957 841 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 FAM83BQ5T0W9 1011 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 CREB3L3Q68CJ9 461 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 SNRNP48Q6IEG0 339 aaKnown RBP15.59■□□□□ 0.09
SGCA-201ENST00000262018 ARMCX2Q7L311 632 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 SPRED2Q7Z698 418 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms