RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ARHGAP33O14559 1287 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 PARP1P09874 1014 aaKnown RBP13.47□□□□□ -0.25
PFDN1-201ENST00000261813 SNAP25P60880 206 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 SYDE2Q5VT97 1194 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 RAB11FIP4Q86YS3 637 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 HSCBQ8IWL3 235 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 FBXL16Q8N461 479 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 NUP133Q8WUM0 1156 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 TRIM47Q96LD4 638 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 UBA5Q9GZZ9 404 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 SPATC1LQ9H0A9 340 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 PORCNQ9H237 461 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 ALDH8A1Q9H2A2 487 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-201ENST00000261813 SLC38A10Q9HBR0 1119 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 ZNF214Q9UL59 606 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-201ENST00000261813 BRPF3Q9ULD4 1205 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 PCDHGA10Q9Y5H3 936 aa13.47□□□□□ -0.25
PFDN1-201ENST00000261813 COL11A1P12107 1806 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-201ENST00000261813 ZNF536O15090 1300 aa13.46□□□□□ -0.25
PFDN1-201ENST00000261813 ZBED4O75132 1171 aa13.46□□□□□ -0.25
PFDN1-201ENST00000261813 DDAH1O94760 285 aa13.46□□□□□ -0.25
PFDN1-201ENST00000261813 RXRAP19793 462 aa13.46□□□□□ -0.25
PFDN1-201ENST00000261813 PSMC4P43686 418 aa13.46□□□□□ -0.25
PFDN1-201ENST00000261813 APOA5Q6Q788 366 aa13.46□□□□□ -0.25
PFDN1-201ENST00000261813 BRF1Q92994 677 aa13.46□□□□□ -0.25
PFDN1-201ENST00000261813 IPO9Q96P70 1041 aaKnown RBP13.46□□□□□ -0.25
PFDN1-201ENST00000261813 MAP3K14Q99558 947 aa13.46□□□□□ -0.25
PFDN1-201ENST00000261813 MOV10L1Q9BXT6 1211 aaKnown RBP13.46□□□□□ -0.25
PFDN1-201ENST00000261813 RANBP17Q9H2T7 1088 aaKnown RBP13.46□□□□□ -0.25
PFDN1-201ENST00000261813 EFCC1Q9HA90 598 aa13.46□□□□□ -0.25
PFDN1-201ENST00000261813 KLF18A0A0U1RQI7 1052 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 FCGRTP55899 365 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 FGD1P98174 961 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 APOBRQ0VD83 1088 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 TOB2Q14106 344 aaPredicted RBP13.45□□□□□ -0.26
PFDN1-201ENST00000261813 PLS1Q14651 629 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 KIF22Q14807 665 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 SLC35G1Q2M3R5 365 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 FBXO46Q6PJ61 603 aaPredicted RBP13.45□□□□□ -0.26
PFDN1-201ENST00000261813 OTOP1Q7RTM1 612 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 RAVER2Q9HCJ3 691 aaKnown RBP13.45□□□□□ -0.26
PFDN1-201ENST00000261813 PDRG1Q9NUG6 133 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 SLC12A7Q9Y666 1083 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 KLRF2D3W0D1 207 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 ATP2A1O14983 1001 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 FMNL1O95466 1100 aaPredicted RBP13.45□□□□□ -0.26
PFDN1-201ENST00000261813 CALM1P0DP23 149 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 CALM2P0DP24 149 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 CALM3P0DP25 149 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 FDX1P10109 184 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 STAT3P40763 770 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 CCNA1P78396 465 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 LSM11P83369 360 aaKnown RBP eCLIP13.45□□□□□ -0.26
PFDN1-201ENST00000261813 SNRNP48Q6IEG0 339 aaKnown RBP13.45□□□□□ -0.26
PFDN1-201ENST00000261813 NBPF11Q86T75 865 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 MICU3Q86XE3 530 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 RIOX2Q8IUF8 465 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 SPNS2Q8IVW8 549 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 CCDC144CPQ8IYA2 1237 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 ADGRF4Q8IZF3 695 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 CPXCR1Q8N123 301 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 ZDHHC16Q969W1 377 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 RIPK3Q9Y572 518 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 TRIM17Q9Y577 477 aa13.45□□□□□ -0.26
PFDN1-201ENST00000261813 MGAMO43451 1857 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 TNPO2O14787 897 aaKnown RBP13.44□□□□□ -0.26
PFDN1-201ENST00000261813 ZBTB43O43298 467 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 TAL1P17542 331 aaPredicted RBP13.44□□□□□ -0.26
PFDN1-201ENST00000261813 ERCC3P19447 782 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 MAPK4P31152 587 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 OAZ1P54368 228 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 CCDC174Q6PII3 467 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 GPR142Q7Z601 462 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 FANCBQ8NB91 859 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 SHCBP1Q8NEM2 672 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 CTCFLQ8NI51 663 aaPredicted RBP13.44□□□□□ -0.26
PFDN1-201ENST00000261813 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
PFDN1-201ENST00000261813 AGBL1Q96MI9 1066 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 TEX13BQ9BXU2 312 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 JMJD4Q9H9V9 463 aa13.44□□□□□ -0.26
PFDN1-201ENST00000261813 CTDP1Q9Y5B0 961 aaPredicted RBP13.44□□□□□ -0.26
PFDN1-201ENST00000261813 CYTH3O43739 400 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 PLEKHA8P1O95397 391 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 SLC25A27O95847 323 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 EVCP57679 992 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 SYNE3Q6ZMZ3 975 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 PLEKHH3Q7Z736 793 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 NCAPG2Q86XI2 1143 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 RIOX1Q9H6W3 641 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 SRRDQ9UH36 339 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 GABRQQ9UN88 632 aa13.43□□□□□ -0.26
PFDN1-201ENST00000261813 NID2Q14112 1375 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 GOLGA8AA7E2F4 631 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 GOLGA8BA8MQT2 603 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 K7ELQ4 463 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-201ENST00000261813 DHX16O60231 1041 aaKnown RBP13.42□□□□□ -0.26
PFDN1-201ENST00000261813 GNRH1P01148 92 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 ICAM1P05362 532 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 KIF5BP33176 963 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms