RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 DUSP10Q9Y6W6 482 aa16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 HIBADHP31937 336 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 TBC1D8BQ0IIM8 1120 aa16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 STIM1Q13586 685 aa16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 DCP1AQ9NPI6 582 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 RMND1Q9NWS8 449 aa16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 POTEB2H3BUK9 544 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 TRIM66O15016 1216 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 ATP1A1P05023 1023 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 USP5P45974 858 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 CSGALNACT2Q8N6G5 542 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 USP17L3A6NCW0 530 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 USP17L4A6NCW7 530 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 H0YIN7 160 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 PPEF1O14829 653 aaPredicted RBP16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 SRGNP10124 158 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 USP17L1Q7RTZ2 530 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 RIN2Q8WYP3 895 aaPredicted RBP16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 TRIM34Q9BYJ4 488 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 TMEM51Q9NW97 253 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 ZNHIT6Q9NWK9 470 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 LCMT1Q9UIC8 334 aa16.21■□□□□ 0.19
SFSWAP-201ENST00000261674 MAP2K7O14733 419 aa16.21■□□□□ 0.18
SFSWAP-201ENST00000261674 PSMA7O14818 248 aa16.21■□□□□ 0.18
SFSWAP-201ENST00000261674 ZNF185O15231 689 aa16.21■□□□□ 0.18
SFSWAP-201ENST00000261674 DNA2P51530 1060 aa16.21■□□□□ 0.18
SFSWAP-201ENST00000261674 GOLGA6L1Q8N7Z2 621 aa16.21■□□□□ 0.18
SFSWAP-201ENST00000261674 TNFRSF25Q93038 417 aa16.21■□□□□ 0.18
SFSWAP-201ENST00000261674 MMS19Q96T76 1030 aa16.21■□□□□ 0.18
SFSWAP-201ENST00000261674 UBXN6Q9BZV1 441 aa16.21■□□□□ 0.18
SFSWAP-201ENST00000261674 RABEP2Q9H5N1 569 aa16.21■□□□□ 0.18
SFSWAP-201ENST00000261674 H7C1D1 291 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 SEMA3EO15041 775 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 KIF5BP33176 963 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 RCAN1P53805 252 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 DIXDC1Q155Q3 683 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 WHAMMP3Q1A5X7 153 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 LETM2Q2VYF4 491 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 DZIP1Q86YF9 867 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 IRF2BP1Q8IU81 584 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 MB21D1Q8N884 522 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 PNMA1Q8ND90 353 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 ANAPC4Q9UJX5 808 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 REXO2Q9Y3B8 237 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 LRRIQ3A6PVS8 624 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 DDAH1O94760 285 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 ASIC1P78348 528 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 PFKFB3Q16875 520 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 TYW1BQ6NUM6 668 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 SLC44A5Q8NCS7 719 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 UIMC1Q96RL1 719 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 MTA3Q9BTC8 594 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 BRIP1Q9BX63 1249 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 DISC1Q9NRI5 854 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 RSPH14Q9UHP6 348 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 SAR1BQ9Y6B6 198 aa16.2■□□□□ 0.18
SFSWAP-201ENST00000261674 EXOC4Q96A65 974 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 CWC15Q9P013 229 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 PDE4DQ08499 809 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 FOXR1Q6PIV2 292 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 KRT26Q7Z3Y9 468 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 FLAD1Q8NFF5 587 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 UPF1Q92900 1129 aaKnown RBP eCLIP16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 NSUN4Q96CB9 384 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 TUBGCP2Q9BSJ2 902 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 LACRTQ9GZZ8 138 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 GBP3Q9H0R5 595 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 SAP30BPQ9UHR5 308 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 GGA1Q9UJY5 639 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 TAF1LQ8IZX4 1826 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 CT47A1Q5JQC4 288 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 ILDR2Q71H61 639 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 SMCR8Q8TEV9 937 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 JAKMIP2Q96AA8 810 aa16.19■□□□□ 0.18
SFSWAP-201ENST00000261674 BAZ2AQ9UIF9 1905 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 LRRC10BA6NIK2 292 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 CALML3P27482 149 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 UBE4AQ14139 1066 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 DPP8Q6V1X1 898 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 LY75O60449 1722 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 IDEP14735 1019 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 ACTN2P35609 894 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 GTF2IP78347 998 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 CCDC96Q2M329 555 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 ANKRD13CQ8N6S4 541 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 MSANTD4Q8NCY6 345 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 TMX4Q9H1E5 349 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 FAM204AQ9H8W3 233 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 ITIH6Q6UXX5 1313 aa16.18■□□□□ 0.18
SFSWAP-201ENST00000261674 DPEP1P16444 411 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 LONP1P36776 959 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 NAP1L1P55209 391 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 ATP2B2Q01814 1243 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 TRIM14Q14142 442 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 ADSSL1Q8N142 457 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 SCAF8Q9UPN6 1271 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 KRT86O43790 486 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 TSPY3P0CV98 308 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 TSPY8P0CW00 308 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 FCER1AP12319 257 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms