RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 PXDNQ92626 1479 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 PCDH11XQ9BZA7 1347 aa11.21□□□□□ -0.62
PALB2-201ENST00000261584 PCDH11YQ9BZA8 1340 aa11.21□□□□□ -0.62
PALB2-201ENST00000261584 MAP2K2P36507 400 aa11.21□□□□□ -0.62
PALB2-201ENST00000261584 PEX19P40855 299 aa11.21□□□□□ -0.62
PALB2-201ENST00000261584 CAPN12Q6ZSI9 719 aa11.21□□□□□ -0.62
PALB2-201ENST00000261584 CLEC10AQ8IUN9 316 aa11.21□□□□□ -0.62
PALB2-201ENST00000261584 NOX5Q96PH1 765 aa11.21□□□□□ -0.62
PALB2-201ENST00000261584 MAP3K14Q99558 947 aa11.21□□□□□ -0.62
PALB2-201ENST00000261584 STK38LQ9Y2H1 464 aa11.21□□□□□ -0.62
PALB2-201ENST00000261584 MYO1FO00160 1098 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
PALB2-201ENST00000261584 BMP15O95972 392 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 CTNNA1P35221 906 aaKnown RBP11.2□□□□□ -0.62
PALB2-201ENST00000261584 ARHGAP44Q17R89 818 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 SUSD4Q5VX71 490 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 ICE2Q659A1 982 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 PHLDB2Q86SQ0 1253 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 DDX42Q86XP3 938 aaKnown RBP eCLIP11.2□□□□□ -0.62
PALB2-201ENST00000261584 TAB3Q8N5C8 712 aaPredicted RBP11.2□□□□□ -0.62
PALB2-201ENST00000261584 FAM133AQ8N9E0 248 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 TBC1D5Q92609 795 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
PALB2-201ENST00000261584 MKRN1Q9UHC7 482 aaKnown RBP11.2□□□□□ -0.62
PALB2-201ENST00000261584 A0A1B0GTH6 734 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 POTEMA6NI47 508 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 MEIS1O00470 390 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 SLC16A2P36021 539 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 PMS1P54277 932 aaKnown RBP11.2□□□□□ -0.62
PALB2-201ENST00000261584 LRRC31Q6UY01 552 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 FNBP4Q8N3X1 1017 aaPredicted RBP11.2□□□□□ -0.62
PALB2-201ENST00000261584 SERPINA10Q9UK55 444 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 CD2APQ9Y5K6 639 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 CEMIPQ8WUJ3 1361 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 CLTAP09496 248 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 GNAT2P19087 354 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 CALML3P27482 149 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 SNAP25P60880 206 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 MEX3CQ5U5Q3 659 aaKnown RBP11.2□□□□□ -0.62
PALB2-201ENST00000261584 GIGYF2Q6Y7W6 1299 aaKnown RBP11.2□□□□□ -0.62
PALB2-201ENST00000261584 TRIML1Q8N9V2 468 aa11.2□□□□□ -0.62
PALB2-201ENST00000261584 DNM2P50570 870 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 PACS2Q86VP3 889 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 H7C1D1 291 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 MYBL2P10244 700 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 MSL1Q68DK7 614 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 SRBD1Q8N5C6 995 aaKnown RBP11.19□□□□□ -0.62
PALB2-201ENST00000261584 ANKRD42Q8N9B4 389 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 MED4Q9NPJ6 270 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 L1RE1Q9UN81 338 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 PTPRUQ92729 1446 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 PPFIA4O75335 1185 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 KIF11P52732 1056 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 PPFIA1Q13136 1202 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 NBPF9Q3BBW0 867 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 USH1GQ495M9 461 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 MICALCLQ6ZW33 695 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 TCP11Q8WWU5 503 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 KIFC2Q96AC6 838 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 ARL8AQ96BM9 186 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 TMEM60Q9H2L4 133 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 TMEM260Q9NX78 707 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 ARPP21Q9UBL0 812 aaPredicted RBP11.19□□□□□ -0.62
PALB2-201ENST00000261584 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.19□□□□□ -0.62
PALB2-201ENST00000261584 BICDL2A1A5D9 508 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 SFI1A8K8P3 1242 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 FGFR1OPO95684 399 aaKnown RBP11.19□□□□□ -0.62
PALB2-201ENST00000261584 STK4Q13043 487 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 CFAP221Q4G0U5 840 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 TADA2BQ86TJ2 420 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 CHORDC1Q9UHD1 332 aaPredicted RBP11.19□□□□□ -0.62
PALB2-201ENST00000261584 HPSEQ9Y251 543 aa11.19□□□□□ -0.62
PALB2-201ENST00000261584 HEG1Q9ULI3 1381 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 SIGLEC1Q9BZZ2 1709 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 LIFRP42702 1097 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 MAGEA9P43362 315 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 USP14P54578 494 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 DHX9Q08211 1270 aaKnown RBP11.18□□□□□ -0.62
PALB2-201ENST00000261584 TCP10Q12799 353 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 UBE2SQ16763 222 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 ZNF658Q5TYW1 1059 aaPredicted RBP11.18□□□□□ -0.62
PALB2-201ENST00000261584 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.18□□□□□ -0.62
PALB2-201ENST00000261584 IFT20Q8IY31 132 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 HSD3B7Q9H2F3 369 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 C6orf50Q9HD87 102 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 FAM217BQ9NTX9 383 aaPredicted RBP11.18□□□□□ -0.62
PALB2-201ENST00000261584 ARHGAP31Q2M1Z3 1444 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 LRRC53A6NM62 1247 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 CIAO1O76071 339 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 PPP1R7Q15435 360 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 ZKSCAN8Q15776 578 aaPredicted RBP11.18□□□□□ -0.62
PALB2-201ENST00000261584 TXNRD1Q16881 649 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 SLC9C1Q4G0N8 1177 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 NBPF3Q9H094 633 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 ATP8A1Q9Y2Q0 1164 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 PCDHA13Q9Y5I0 950 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 KIAA1210Q9ULL0 1709 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 CLIC2O15247 247 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms