RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 USP17L24Q0WX57 530 aa20.03■□□□□ 0.8
SRSF1-201ENST00000258962 PKN2Q16513 984 aaKnown RBP20.03■□□□□ 0.8
SRSF1-201ENST00000258962 ANO1Q5XXA6 986 aa20.03■□□□□ 0.8
SRSF1-201ENST00000258962 WWC2Q6AWC2 1192 aa20.03■□□□□ 0.8
SRSF1-201ENST00000258962 GPKOWQ92917 476 aaPredicted RBP eCLIP20.03■□□□□ 0.8
SRSF1-201ENST00000258962 TNFRSF25Q93038 417 aa20.03■□□□□ 0.8
SRSF1-201ENST00000258962 MCOLN1Q9GZU1 580 aa20.03■□□□□ 0.8
SRSF1-201ENST00000258962 UBA5Q9GZZ9 404 aa20.03■□□□□ 0.8
SRSF1-201ENST00000258962 RIOX1Q9H6W3 641 aa20.03■□□□□ 0.8
SRSF1-201ENST00000258962 EFCC1Q9HA90 598 aa20.03■□□□□ 0.8
SRSF1-201ENST00000258962 ISY1Q9ULR0 285 aaKnown RBP20.03■□□□□ 0.8
SRSF1-201ENST00000258962 TMX2Q9Y320 296 aa20.03■□□□□ 0.8
SRSF1-201ENST00000258962 TRIM17Q9Y577 477 aa20.03■□□□□ 0.8
SRSF1-201ENST00000258962 ADGRA2Q96PE1 1338 aa20.02■□□□□ 0.8
SRSF1-201ENST00000258962 VCAM1P19320 739 aa20.02■□□□□ 0.8
SRSF1-201ENST00000258962 TYW1BQ6NUM6 668 aa20.02■□□□□ 0.8
SRSF1-201ENST00000258962 LPAR1Q92633 364 aa20.02■□□□□ 0.8
SRSF1-201ENST00000258962 SH3GLB2Q9NR46 395 aa20.02■□□□□ 0.8
SRSF1-201ENST00000258962 ADAMTS3O15072 1205 aa20.02■□□□□ 0.79
SRSF1-201ENST00000258962 BCRP11274 1271 aa20.02■□□□□ 0.79
SRSF1-201ENST00000258962 LIG1P18858 919 aa20.02■□□□□ 0.79
SRSF1-201ENST00000258962 TOB1P50616 345 aaPredicted RBP20.02■□□□□ 0.79
SRSF1-201ENST00000258962 LACTBP83111 547 aaPredicted RBP20.02■□□□□ 0.79
SRSF1-201ENST00000258962 P2RX7Q99572 595 aaKnown RBP20.02■□□□□ 0.79
SRSF1-201ENST00000258962 GOPCQ9HD26 462 aa20.02■□□□□ 0.79
SRSF1-201ENST00000258962 GPCPD1Q9NPB8 672 aa20.02■□□□□ 0.79
SRSF1-201ENST00000258962 LOC285556D6RIA3 1793 aa20.01■□□□□ 0.79
SRSF1-201ENST00000258962 FAM205CA6NFA0 338 aa20.01■□□□□ 0.79
SRSF1-201ENST00000258962 STXBP3O00186 592 aa20.01■□□□□ 0.79
SRSF1-201ENST00000258962 RAD21O60216 631 aa20.01■□□□□ 0.79
SRSF1-201ENST00000258962 ZNF445P59923 1031 aa20.01■□□□□ 0.79
SRSF1-201ENST00000258962 STK38Q15208 465 aa20.01■□□□□ 0.79
SRSF1-201ENST00000258962 PTPAQ15257 358 aa20.01■□□□□ 0.79
SRSF1-201ENST00000258962 EARS2Q5JPH6 523 aaKnown RBP20.01■□□□□ 0.79
SRSF1-201ENST00000258962 ANKRD13CQ8N6S4 541 aa20.01■□□□□ 0.79
SRSF1-201ENST00000258962 RPAP3Q9H6T3 665 aaPredicted RBP20.01■□□□□ 0.79
SRSF1-201ENST00000258962 VCPKMTQ9H867 229 aa20.01■□□□□ 0.79
SRSF1-201ENST00000258962 BARHL2Q9NY43 387 aa20.01■□□□□ 0.79
SRSF1-201ENST00000258962 GOLGA6L4A6NEF3 574 aa20■□□□□ 0.79
SRSF1-201ENST00000258962 NLRP5P59047 1200 aa20■□□□□ 0.79
SRSF1-201ENST00000258962 HERVK_113P62684 666 aa20■□□□□ 0.79
SRSF1-201ENST00000258962 SF3A1Q15459 793 aaKnown RBP20■□□□□ 0.79
SRSF1-201ENST00000258962 TTBK2Q6IQ55 1244 aa20■□□□□ 0.79
SRSF1-201ENST00000258962 CATSPERGQ6ZRH7 1159 aa20■□□□□ 0.79
SRSF1-201ENST00000258962 OTOP1Q7RTM1 612 aa20■□□□□ 0.79
SRSF1-201ENST00000258962 HEATR3Q7Z4Q2 680 aa20■□□□□ 0.79
SRSF1-201ENST00000258962 GTF3C2Q8WUA4 911 aaPredicted RBP20■□□□□ 0.79
SRSF1-201ENST00000258962 DCAF4Q8WV16 495 aa20■□□□□ 0.79
SRSF1-201ENST00000258962 RRP36Q96EU6 259 aaKnown RBP20■□□□□ 0.79
SRSF1-201ENST00000258962 PIGSQ96S52 555 aa20■□□□□ 0.79
SRSF1-201ENST00000258962 SPTLC2O15270 562 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 ECM2O94769 699 aaPredicted RBP19.99■□□□□ 0.79
SRSF1-201ENST00000258962 PSMC4P43686 418 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 SLC39A14Q15043 492 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 CCDC96Q2M329 555 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 GPATCH4Q5T3I0 446 aaKnown RBP19.99■□□□□ 0.79
SRSF1-201ENST00000258962 SLFN13Q68D06 897 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 KCTD1Q719H9 257 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 GAS2L3Q86XJ1 694 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 HOMER1Q86YM7 354 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 SPICE1Q8N0Z3 855 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 GMCL1P1Q8NEA9 526 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 KCNG4Q8TDN1 519 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 SYAP1Q96A49 352 aaPredicted RBP19.99■□□□□ 0.79
SRSF1-201ENST00000258962 TANGO6Q9C0B7 1094 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 VAT1LQ9HCJ6 419 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 BRMS1Q9HCU9 246 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 PCDHA7Q9UN72 937 aa19.99■□□□□ 0.79
SRSF1-201ENST00000258962 FSD2A1L4K1 749 aa19.98■□□□□ 0.79
SRSF1-201ENST00000258962 GNRH1P01148 92 aa19.98■□□□□ 0.79
SRSF1-201ENST00000258962 CALML3P27482 149 aa19.98■□□□□ 0.79
SRSF1-201ENST00000258962 ME1P48163 572 aa19.98■□□□□ 0.79
SRSF1-201ENST00000258962 FAM110CQ1W6H9 321 aa19.98■□□□□ 0.79
SRSF1-201ENST00000258962 RILPL1Q5EBL4 403 aa19.98■□□□□ 0.79
SRSF1-201ENST00000258962 CCDC183Q5T5S1 534 aa19.98■□□□□ 0.79
SRSF1-201ENST00000258962 L1TD1Q5T7N2 865 aaKnown RBP19.98■□□□□ 0.79
SRSF1-201ENST00000258962 BICD2Q8TD16 824 aa19.98■□□□□ 0.79
SRSF1-201ENST00000258962 SYNPO2Q9UMS6 1093 aa19.98■□□□□ 0.79
SRSF1-201ENST00000258962 F5H6K3 240 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 NDUFB10O96000 172 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 HOXD10P28358 340 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 FCGRTP55899 365 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 KLRC3Q07444 240 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 FBXO46Q6PJ61 603 aaPredicted RBP19.97■□□□□ 0.79
SRSF1-201ENST00000258962 ADGRF4Q8IZF3 695 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 FAM177A1Q8N128 213 aaPredicted RBP19.97■□□□□ 0.79
SRSF1-201ENST00000258962 DAGLBQ8NCG7 672 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 ABHD8Q96I13 439 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 ARHGAP39Q9C0H5 1083 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 JMJD4Q9H9V9 463 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 HOXC10Q9NYD6 342 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 SEC63Q9UGP8 760 aaKnown RBP19.97■□□□□ 0.79
SRSF1-201ENST00000258962 PCDHA4Q9UN74 947 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 SYCE3A1L190 88 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 M0R2N6 131 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 WDR46O15213 610 aaKnown RBP19.97■□□□□ 0.79
SRSF1-201ENST00000258962 SLC16A2P36021 539 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 COG2Q14746 738 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 KIAA1755Q5JYT7 1200 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 BLIDQ8IZY5 108 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms