RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 LRRIQ3A6PVS8 624 aaPredicted RBP15.09■□□□□ 0.01
VHL-201ENST00000256474 CYTH3O43739 400 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 KRT86O43790 486 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 LONP1P36776 959 aaKnown RBP15.09■□□□□ 0.01
VHL-201ENST00000256474 KIF5AQ12840 1032 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 NELFCDQ8IXH7 590 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 TNFRSF25Q93038 417 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 TMEM47Q9BQJ4 181 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 NHEJ1Q9H9Q4 299 aaPredicted RBP15.09■□□□□ 0.01
VHL-201ENST00000256474 ARPP21Q9UBL0 812 aaPredicted RBP15.09■□□□□ 0.01
VHL-201ENST00000256474 ANAPC4Q9UJX5 808 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 POTEMA6NI47 508 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 RIMBP2O15034 1052 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 CYLC1P35663 651 aaPredicted RBP15.09■□□□□ 0.01
VHL-201ENST00000256474 PBX1P40424 430 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 RRAGAQ7L523 313 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 TMC4Q7Z404 712 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 FAM204AQ9H8W3 233 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 NAALADL2Q58DX5 795 aa15.08■□□□□ 0.01
VHL-201ENST00000256474 ADSSL1Q8N142 457 aa15.08■□□□□ 0.01
VHL-201ENST00000256474 TBCKQ8TEA7 893 aa15.08■□□□□ 0.01
VHL-201ENST00000256474 ATP8A2Q9NTI2 1148 aa15.08■□□□□ 0.01
VHL-201ENST00000256474 LCMT1Q9UIC8 334 aa15.08■□□□□ 0.01
VHL-201ENST00000256474 COL1A1P02452 1464 aaPredicted RBP15.08■□□□□ 0.01
VHL-201ENST00000256474 TEX11Q8IYF3 940 aa15.08■□□□□ 0
VHL-201ENST00000256474 EYA3Q99504 573 aa15.08■□□□□ 0
VHL-201ENST00000256474 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.08■□□□□ 0
VHL-201ENST00000256474 LGALS16A8MUM7 142 aa15.08■□□□□ 0
VHL-201ENST00000256474 C6orf229H3BNL8 230 aa15.08■□□□□ 0
VHL-201ENST00000256474 NCK2O43639 380 aa15.08■□□□□ 0
VHL-201ENST00000256474 MOCS3O95396 460 aa15.08■□□□□ 0
VHL-201ENST00000256474 POTEDQ86YR6 584 aa15.08■□□□□ 0
VHL-201ENST00000256474 CCDC51Q96ER9 411 aa15.08■□□□□ 0
VHL-201ENST00000256474 CALML4Q96GE6 196 aa15.08■□□□□ 0
VHL-201ENST00000256474 BAZ2AQ9UIF9 1905 aaKnown RBP15.08■□□□□ 0
VHL-201ENST00000256474 C4AP0C0L4 1744 aa15.08■□□□□ 0
VHL-201ENST00000256474 C4BP0C0L5 1744 aa15.08■□□□□ 0
VHL-201ENST00000256474 HERVK_113P62684 666 aa15.07■□□□□ 0
VHL-201ENST00000256474 TPTE2Q6XPS3 522 aa15.07■□□□□ 0
VHL-201ENST00000256474 CENPHQ9H3R5 247 aa15.07■□□□□ 0
VHL-201ENST00000256474 OR52Z1P0C646 297 aa15.07■□□□□ 0
VHL-201ENST00000256474 EZH2Q15910 746 aaKnown RBP15.07■□□□□ 0
VHL-201ENST00000256474 WHAMMP3Q1A5X7 153 aa15.07■□□□□ 0
VHL-201ENST00000256474 LRRC15Q8TF66 581 aa15.07■□□□□ 0
VHL-201ENST00000256474 C8orf37Q96NL8 207 aa15.07■□□□□ 0
VHL-201ENST00000256474 BAG3O95817 575 aa15.07■□□□□ 0
VHL-201ENST00000256474 SLC16A2P36021 539 aa15.07■□□□□ 0
VHL-201ENST00000256474 NONOQ15233 471 aaKnown RBP eCLIP15.07■□□□□ 0
VHL-201ENST00000256474 SMARCC1Q92922 1105 aaPredicted RBP15.07■□□□□ 0
VHL-201ENST00000256474 NUP188Q5SRE5 1749 aa15.07■□□□□ 0
VHL-201ENST00000256474 LAMB4A4D0S4 1761 aa15.06■□□□□ 0
VHL-201ENST00000256474 UBE2SQ16763 222 aa15.06■□□□□ 0
VHL-201ENST00000256474 GLIS3Q8NEA6 775 aa15.06■□□□□ 0
VHL-201ENST00000256474 P2RX5Q93086 422 aa15.06■□□□□ 0
VHL-201ENST00000256474 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.06■□□□□ 0
VHL-201ENST00000256474 SPEF2Q9C093 1822 aa15.06■□□□□ 0
VHL-201ENST00000256474 BTDP43251 543 aa15.06■□□□□ 0
VHL-201ENST00000256474 KRT83P78385 493 aa15.06■□□□□ 0
VHL-201ENST00000256474 APBA1Q02410 837 aa15.06■□□□□ 0
VHL-201ENST00000256474 ELOA2Q8IYF1 753 aaPredicted RBP15.06■□□□□ 0
VHL-201ENST00000256474 GBP3Q9H0R5 595 aa15.06■□□□□ 0
VHL-201ENST00000256474 POTEB2H3BUK9 544 aa15.06■□□□□ 0
VHL-201ENST00000256474 KRT18P05783 430 aaKnown RBP15.06■□□□□ 0
VHL-201ENST00000256474 DNM2P50570 870 aa15.06■□□□□ 0
VHL-201ENST00000256474 SND1Q7KZF4 910 aaKnown RBP eCLIP15.06■□□□□ 0
VHL-201ENST00000256474 FBXO33Q7Z6M2 555 aa15.06■□□□□ 0
VHL-201ENST00000256474 DNAAF5Q86Y56 855 aa15.06■□□□□ 0
VHL-201ENST00000256474 IFIH1Q9BYX4 1025 aaKnown RBP15.06■□□□□ 0
VHL-201ENST00000256474 ACBD3Q9H3P7 528 aa15.06■□□□□ 0
VHL-201ENST00000256474 HAUS4Q9H6D7 363 aa15.06■□□□□ 0
VHL-201ENST00000256474 L1RE1Q9UN81 338 aa15.06■□□□□ 0
VHL-201ENST00000256474 RNF40O75150 1001 aa15.05■□□□□ 0
VHL-201ENST00000256474 TDP2O95551 362 aa15.05■□□□□ 0
VHL-201ENST00000256474 TRAPPC10P48553 1259 aa15.05■□□□□ 0
VHL-201ENST00000256474 SLC35G1Q2M3R5 365 aa15.05■□□□□ 0
VHL-201ENST00000256474 CCDC40Q4G0X9 1142 aa15.05■□□□□ 0
VHL-201ENST00000256474 WDR59Q6PJI9 974 aa15.05■□□□□ 0
VHL-201ENST00000256474 SECISBP2LQ93073 1101 aaKnown RBP15.05■□□□□ 0
VHL-201ENST00000256474 RRP36Q96EU6 259 aaKnown RBP15.05■□□□□ 0
VHL-201ENST00000256474 MAD2L2Q9UI95 211 aa15.05■□□□□ 0
VHL-201ENST00000256474 PKD1L3Q7Z443 1732 aa15.05■□□□□ 0
VHL-201ENST00000256474 DCCP43146 1447 aa15.05■□□□□ 0
VHL-201ENST00000256474 USP17L5A8MUK1 530 aa15.05■□□□□ -0
VHL-201ENST00000256474 UFL1O94874 794 aa15.05■□□□□ -0
VHL-201ENST00000256474 TRIM14Q14142 442 aa15.05■□□□□ -0
VHL-201ENST00000256474 C12orf60Q5U649 245 aa15.05■□□□□ -0
VHL-201ENST00000256474 SNX29Q8TEQ0 813 aa15.05■□□□□ -0
VHL-201ENST00000256474 C6orf50Q9HD87 102 aa15.05■□□□□ -0
VHL-201ENST00000256474 CWC15Q9P013 229 aaKnown RBP15.05■□□□□ -0
VHL-201ENST00000256474 RCAN1P53805 252 aa15.05■□□□□ -0
VHL-201ENST00000256474 TRMT1LQ7Z2T5 733 aaKnown RBP15.05■□□□□ -0
VHL-201ENST00000256474 PROCA1Q8NCQ7 364 aaPredicted RBP15.05■□□□□ -0
VHL-201ENST00000256474 IFT81Q8WYA0 676 aa15.05■□□□□ -0
VHL-201ENST00000256474 ADAMTSL3P82987 1691 aa15.04■□□□□ -0
VHL-201ENST00000256474 SEMA3EO15041 775 aa15.04■□□□□ -0
VHL-201ENST00000256474 EPHB6O15197 1021 aa15.04■□□□□ -0
VHL-201ENST00000256474 ORC4O43929 436 aa15.04■□□□□ -0
VHL-201ENST00000256474 RFC4P35249 363 aa15.04■□□□□ -0
VHL-201ENST00000256474 RASSF7Q02833 373 aa15.04■□□□□ -0
VHL-201ENST00000256474 CCDC70Q6NSX1 233 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms