RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 IRS2Q9Y4H2 1338 aa13.17□□□□□ -0.3
CCNA1-201ENST00000255465 DNAJC8O75937 253 aaPredicted RBP13.17□□□□□ -0.3
CCNA1-201ENST00000255465 PDE8BO95263 885 aa13.17□□□□□ -0.3
CCNA1-201ENST00000255465 GJA8P48165 433 aa13.17□□□□□ -0.3
CCNA1-201ENST00000255465 VSNL1P62760 191 aa13.17□□□□□ -0.3
CCNA1-201ENST00000255465 C15orf52Q6ZUT6 534 aaKnown RBP13.17□□□□□ -0.3
CCNA1-201ENST00000255465 CCDC80Q76M96 950 aa13.17□□□□□ -0.3
CCNA1-201ENST00000255465 GPC2Q8N158 579 aa13.17□□□□□ -0.3
CCNA1-201ENST00000255465 VGLL2Q8N8G2 317 aa13.17□□□□□ -0.3
CCNA1-201ENST00000255465 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
CCNA1-201ENST00000255465 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
CCNA1-201ENST00000255465 UPF3BQ9BZI7 483 aaKnown RBP13.17□□□□□ -0.3
CCNA1-201ENST00000255465 RRAGCQ9HB90 399 aa13.17□□□□□ -0.3
CCNA1-201ENST00000255465 FRMD3A2A2Y4 597 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 CTAGE15A4D2H0 777 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 RAD17O75943 681 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 NPTXRO95502 500 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 VIMP08670 466 aaKnown RBP13.16□□□□□ -0.3
CCNA1-201ENST00000255465 CTAGE8P0CG41 777 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 GHRP10912 638 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 GJB2P29033 226 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCNA1-201ENST00000255465 UBE4AQ14139 1066 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 POLA2Q14181 598 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 CIAPIN1Q6FI81 312 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 CEP85Q6P2H3 762 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 C6orf89Q6UWU4 347 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 CTAGE6Q86UF2 777 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 CTAGE4Q8IX94 777 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 SSH3Q8TE77 659 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 RPGRIP1Q96KN7 1286 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 WDR24Q96S15 920 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 KCNQ5Q9NR82 932 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 GJA3Q9Y6H8 435 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 POTECB2RU33 542 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 IL15P40933 162 aaPredicted RBP13.16□□□□□ -0.3
CCNA1-201ENST00000255465 ZBED6P86452 979 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 SLC4A8Q2Y0W8 1093 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 KLHL10Q6JEL2 608 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 XPO4Q9C0E2 1151 aaKnown RBP13.16□□□□□ -0.3
CCNA1-201ENST00000255465 EPN3Q9H201 632 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 CENPHQ9H3R5 247 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 UNC45AQ9H3U1 944 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 SENP2Q9HC62 589 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 DNAAF2Q9NVR5 837 aaKnown RBP13.16□□□□□ -0.3
CCNA1-201ENST00000255465 PALD1Q9ULE6 856 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 MYH13Q9UKX3 1938 aa13.16□□□□□ -0.3
CCNA1-201ENST00000255465 AOX1Q06278 1338 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 IKBKBO14920 756 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 HMMRO75330 724 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 ZNF24P17028 368 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 PAX3P23760 479 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 SH3BGRP55822 239 aaPredicted RBP13.15□□□□□ -0.3
CCNA1-201ENST00000255465 TNIP1Q15025 636 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 ATL3Q6DD88 541 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 PODNQ7Z5L7 613 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 CCDC12Q8WUD4 166 aaPredicted RBP13.15□□□□□ -0.3
CCNA1-201ENST00000255465 NSMCE1Q8WV22 266 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
CCNA1-201ENST00000255465 L3MBTL3Q96JM7 780 aaPredicted RBP13.15□□□□□ -0.3
CCNA1-201ENST00000255465 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCNA1-201ENST00000255465 COA1Q9GZY4 146 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 ZWILCHQ9H900 591 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 PHF24Q9UPV7 400 aa13.15□□□□□ -0.3
CCNA1-201ENST00000255465 BUB1BO60566 1050 aaPredicted RBP13.14□□□□□ -0.31
CCNA1-201ENST00000255465 NR1I2O75469 434 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 PDHBP11177 359 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 VEGFAP15692 232 aaPredicted RBP13.14□□□□□ -0.31
CCNA1-201ENST00000255465 VCAM1P19320 739 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 CMPK2Q5EBM0 449 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 ARMC9Q7Z3E5 817 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 SESTD1Q86VW0 696 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 C1orf131Q8NDD1 294 aaKnown RBP13.14□□□□□ -0.31
CCNA1-201ENST00000255465 TEKT1Q969V4 418 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 TBC1D31Q96DN5 1066 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 SCLT1Q96NL6 688 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 ARPC5LQ9BPX5 153 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 NOP53Q9NZM5 478 aaKnown RBP13.14□□□□□ -0.31
CCNA1-201ENST00000255465 ZFATQ9P243 1243 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 MYO1AQ9UBC5 1043 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 ARAP2Q8WZ64 1704 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 STXBP3O00186 592 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 PSMD14O00487 310 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 PFKFB2O60825 505 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 FGFR2P21802 821 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 APBA1Q02410 837 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 LBRQ14739 615 aaKnown RBP13.14□□□□□ -0.31
CCNA1-201ENST00000255465 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
CCNA1-201ENST00000255465 RNF168Q8IYW5 571 aaPredicted RBP13.14□□□□□ -0.31
CCNA1-201ENST00000255465 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 CD209Q9NNX6 404 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 CFAP45Q9UL16 551 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 TMCO1Q9UM00 188 aa13.14□□□□□ -0.31
CCNA1-201ENST00000255465 LINGO3P0C6S8 592 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 GNAT1P11488 350 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 DESP17661 470 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 RPL13P26373 211 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms