RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PHF20Q9BVI0 1012 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 MMRN2Q9H8L6 949 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 BARHL2Q9NY43 387 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 N4BP2Q86UW6 1770 aaPredicted RBP13.2□□□□□ -0.3
LIN28A-201ENST00000254231 ZBTB5O15062 677 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 EVCP57679 992 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 ADALQ6DHV7 355 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 NCAPG2Q86XI2 1143 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 SMCR8Q8TEV9 937 aaPredicted RBP13.19□□□□□ -0.3
LIN28A-201ENST00000254231 TTC12Q9H892 705 aaPredicted RBP13.19□□□□□ -0.3
LIN28A-201ENST00000254231 PCDHA5Q9Y5H7 936 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 NEMFO60524 1076 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 ENTPD3O75355 529 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 TCP11L1Q9NUJ3 509 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 SFI1A8K8P3 1242 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 ADCY5O95622 1261 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
LIN28A-201ENST00000254231 EPHX2P34913 555 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 TXLNAP40222 546 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 CCDC12Q8WUD4 166 aaPredicted RBP13.19□□□□□ -0.3
LIN28A-201ENST00000254231 AMNQ9BXJ7 453 aa13.19□□□□□ -0.3
LIN28A-201ENST00000254231 NFIBO00712 420 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 CALCRLQ16602 461 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 CERS3Q8IU89 383 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 PDS5AQ29RF7 1337 aaKnown RBP13.18□□□□□ -0.3
LIN28A-201ENST00000254231 SLC37A4O43826 429 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 NF2P35240 595 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 GOLGA8FQ08AF8 430 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 GOLGA8DPQ0D2H9 430 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 ASPRV1Q53RT3 343 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 PNMA6FA0A0J9YX94 578 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 SERPINC1P01008 464 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 NEK8Q86SG6 692 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 CCDC43Q96MW1 224 aaKnown RBP13.18□□□□□ -0.3
LIN28A-201ENST00000254231 FOXP1Q9H334 677 aaPredicted RBP13.18□□□□□ -0.3
LIN28A-201ENST00000254231 TMOD4Q9NZQ9 345 aa13.18□□□□□ -0.3
LIN28A-201ENST00000254231 ABT1Q9ULW3 272 aaKnown RBP13.18□□□□□ -0.3
LIN28A-201ENST00000254231 LAMB2P55268 1798 aa13.17□□□□□ -0.3
LIN28A-201ENST00000254231 GPATCH4Q5T3I0 446 aaKnown RBP13.17□□□□□ -0.3
LIN28A-201ENST00000254231 RRAGBQ5VZM2 374 aa13.17□□□□□ -0.3
LIN28A-201ENST00000254231 DDX19AQ9NUU7 478 aaKnown RBP13.17□□□□□ -0.3
LIN28A-201ENST00000254231 LRWD1Q9UFC0 647 aa13.17□□□□□ -0.3
LIN28A-201ENST00000254231 LRRC41Q15345 812 aa13.17□□□□□ -0.3
LIN28A-201ENST00000254231 SNX29Q8TEQ0 813 aa13.17□□□□□ -0.3
LIN28A-201ENST00000254231 CBX8Q9HC52 389 aa13.17□□□□□ -0.3
LIN28A-201ENST00000254231 ABCB11O95342 1321 aa13.17□□□□□ -0.3
LIN28A-201ENST00000254231 CYP2C8P10632 490 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 LDHDQ86WU2 507 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 TPH2Q8IWU9 490 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 FAM177A1Q8N128 213 aaPredicted RBP13.16□□□□□ -0.3
LIN28A-201ENST00000254231 PIGOQ8TEQ8 1089 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 POLR3EQ9NVU0 708 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
LIN28A-201ENST00000254231 HERC5Q9UII4 1024 aaKnown RBP13.16□□□□□ -0.3
LIN28A-201ENST00000254231 C10orf71Q711Q0 1435 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 IRF6O14896 467 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 U2AF2P26368 475 aaKnown RBP eCLIP13.16□□□□□ -0.3
LIN28A-201ENST00000254231 ASIC1P78348 528 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 IRX3P78415 501 aaPredicted RBP13.16□□□□□ -0.3
LIN28A-201ENST00000254231 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
LIN28A-201ENST00000254231 CLSTN2Q9H4D0 955 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 COL4A5P29400 1685 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 DCAF15Q66K64 600 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 GPC2Q8N158 579 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 SMARCE1Q969G3 411 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 PCMTD1Q96MG8 357 aaPredicted RBP13.16□□□□□ -0.3
LIN28A-201ENST00000254231 WDR19Q8NEZ3 1342 aa13.16□□□□□ -0.3
LIN28A-201ENST00000254231 A0A087X0B3 334 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 ZBTB39O15060 712 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 HDLBPQ00341 1268 aaKnown RBP13.15□□□□□ -0.3
LIN28A-201ENST00000254231 ANKRD35Q8N283 1001 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 ANKRD31Q8N7Z5 1873 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 FZD9O00144 591 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 YEATS4O95619 227 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 VGLL4Q14135 290 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 AXDND1Q5T1B0 1012 aaPredicted RBP13.15□□□□□ -0.3
LIN28A-201ENST00000254231 CHURC1Q8WUH1 139 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 VCPKMTQ9H867 229 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 RGL1Q9NZL6 768 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 CNTNAP1P78357 1384 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 PGK2P07205 417 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 VCAM1P19320 739 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 CCT6AP40227 531 aaKnown RBP13.15□□□□□ -0.3
LIN28A-201ENST00000254231 PABPC4Q13310 644 aaKnown RBP eCLIP13.15□□□□□ -0.3
LIN28A-201ENST00000254231 SUPT20HL1Q3ZLR7 823 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 SLC10A4Q96EP9 437 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 NRBP1Q9UHY1 535 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 RIPK3Q9Y572 518 aa13.15□□□□□ -0.3
LIN28A-201ENST00000254231 SNED1Q8TER0 1413 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
LIN28A-201ENST00000254231 ATP1A3P13637 1013 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 SNW1Q13573 536 aaKnown RBP13.14□□□□□ -0.31
LIN28A-201ENST00000254231 NELFCDQ8IXH7 590 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 ANO3Q9BYT9 981 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms