RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 COBLO75128 1261 aa28.38■■■□□ 2.13
TMEM55B-201ENST00000250489 NPM3O75607 178 aaKnown RBP28.38■■■□□ 2.13
TMEM55B-201ENST00000250489 PBX1P40424 430 aa28.38■■■□□ 2.13
TMEM55B-201ENST00000250489 SH3BP5LQ7L8J4 393 aa28.38■■■□□ 2.13
TMEM55B-201ENST00000250489 MTMR8Q96EF0 704 aa28.38■■■□□ 2.13
TMEM55B-201ENST00000250489 RIC8AQ9NPQ8 531 aa28.38■■■□□ 2.13
TMEM55B-201ENST00000250489 PI4KBQ9UBF8 816 aa28.38■■■□□ 2.13
TMEM55B-201ENST00000250489 SERPINA10Q9UK55 444 aa28.38■■■□□ 2.13
TMEM55B-201ENST00000250489 FAM196BA6NMK8 535 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 ARHGAP6O43182 974 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 PRCPP42785 496 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 SEMA3FQ13275 785 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 AOC3Q16853 763 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 KMT5BQ4FZB7 885 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 ZNF710Q8N1W2 664 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 MTMR9Q96QG7 549 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 EDIL3O43854 480 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 TECP42680 631 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 SLC15A2Q16348 729 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 KCTD1Q719H9 257 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 IGSF22Q8N9C0 903 aa28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 BAG1Q99933 345 aaPredicted RBP28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 LIMA1Q9UHB6 759 aaKnown RBP28.37■■■□□ 2.13
TMEM55B-201ENST00000250489 SLC16A2P36021 539 aa28.36■■■□□ 2.13
TMEM55B-201ENST00000250489 ADKP55263 362 aaKnown RBP28.36■■■□□ 2.13
TMEM55B-201ENST00000250489 FILIP1LQ4L180 1135 aa28.36■■■□□ 2.13
TMEM55B-201ENST00000250489 ADSSL1Q8N142 457 aa28.36■■■□□ 2.13
TMEM55B-201ENST00000250489 KIF18AQ8NI77 898 aa28.36■■■□□ 2.13
TMEM55B-201ENST00000250489 USP17L10C9JJH3 530 aa28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 ZBTB5O15062 677 aa28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 CERKLQ49MI3 558 aaPredicted RBP28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 MKL1Q969V6 931 aa28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 MAP7D2Q96T17 732 aa28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 MMTAG2Q9BU76 263 aaKnown RBP28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 STX10O60499 249 aa28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 RHOBTB3O94955 611 aa28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 CLK2P49760 499 aaKnown RBP28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 SPAG1Q07617 926 aa28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 CALCRLQ16602 461 aa28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 NYAP2Q9P242 653 aa28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 MAPK8IP1Q9UQF2 711 aa28.35■■■□□ 2.13
TMEM55B-201ENST00000250489 LRRC10BA6NIK2 292 aa28.34■■■□□ 2.13
TMEM55B-201ENST00000250489 EEF2P13639 858 aaKnown RBP28.34■■■□□ 2.13
TMEM55B-201ENST00000250489 KRT31Q15323 416 aa28.34■■■□□ 2.13
TMEM55B-201ENST00000250489 SHROOM1Q2M3G4 852 aaPredicted RBP28.34■■■□□ 2.13
TMEM55B-201ENST00000250489 TATDN1Q6P1N9 297 aa28.34■■■□□ 2.13
TMEM55B-201ENST00000250489 ZSCAN29Q8IWY8 852 aaPredicted RBP28.34■■■□□ 2.13
TMEM55B-201ENST00000250489 SLC37A4O43826 429 aa28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 TDP2O95551 362 aa28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 TUBB4AP04350 444 aa28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 TXKP42681 527 aa28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 PDCL3Q9H2J4 239 aa28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 KANSL2Q9H9L4 492 aa28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 FXR2P51116 673 aaKnown RBP eCLIP28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 UBE2SQ16763 222 aa28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 MTERF4Q7Z6M4 381 aaKnown RBP28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 GIMAP8Q8ND71 665 aaPredicted RBP28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 CUL5Q93034 780 aa28.33■■■□□ 2.13
TMEM55B-201ENST00000250489 AKR1B15C9JRZ8 316 aaPredicted RBP28.32■■■□□ 2.12
TMEM55B-201ENST00000250489 TNNI2P48788 182 aa28.32■■■□□ 2.12
TMEM55B-201ENST00000250489 CC2D2BQ6DHV5 1058 aa28.32■■■□□ 2.12
TMEM55B-201ENST00000250489 DCAF4Q8WV16 495 aa28.32■■■□□ 2.12
TMEM55B-201ENST00000250489 TRIM34Q9BYJ4 488 aa28.32■■■□□ 2.12
TMEM55B-201ENST00000250489 REXO1L1PQ8IX06 675 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 C7orf25Q9BPX7 421 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 TRIM9Q9C026 710 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 ITIH6Q6UXX5 1313 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 KCNJ18B7U540 433 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 H7C1D1 291 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 MRPL12P52815 198 aaKnown RBP28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 KCNJ12Q14500 433 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 EZH2Q15910 746 aaKnown RBP28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 TCP11X2Q5H9J9 407 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 SUPT20HQ8NEM7 779 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 CALML4Q96GE6 196 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 PANX2Q96RD6 677 aa28.31■■■□□ 2.12
TMEM55B-201ENST00000250489 ZSCAN12O43309 604 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 CCT6AP40227 531 aaKnown RBP28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 COPB1P53618 953 aaKnown RBP28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 SYCP1Q15431 976 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 SLFN13Q68D06 897 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 PPFIBP1Q86W92 1011 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 SIAH1Q8IUQ4 282 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 TDRD3Q9H7E2 651 aaKnown RBP28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 STK32BQ9NY57 414 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 LRWD1Q9UFC0 647 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 RBL2Q08999 1139 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 STIM1Q13586 685 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 SEPT2Q15019 361 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 TMEM266Q2M3C6 531 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 PPP4R3AQ6IN85 833 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 SYT10Q6XYQ8 523 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 ANKRD20A12PQ8NF67 263 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 PPP2R2CQ9Y2T4 447 aa28.3■■■□□ 2.12
TMEM55B-201ENST00000250489 ATRNL1Q5VV63 1379 aa28.29■■■□□ 2.12
TMEM55B-201ENST00000250489 TRIM49BA6NDI0 452 aa28.29■■■□□ 2.12
TMEM55B-201ENST00000250489 SLC1A4P43007 532 aa28.29■■■□□ 2.12
TMEM55B-201ENST00000250489 GRB10Q13322 594 aa28.29■■■□□ 2.12
TMEM55B-201ENST00000250489 TMEM179Q6ZVK1 233 aa28.29■■■□□ 2.12
TMEM55B-201ENST00000250489 CAMKK2Q96RR4 588 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms