RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 PARP1P09874 1014 aaKnown RBP24.72■■□□□ 1.55
HCFC1R1-201ENST00000248089 USH1GQ495M9 461 aa24.72■■□□□ 1.55
HCFC1R1-201ENST00000248089 BMP2KLQ5H9B9 411 aa24.72■■□□□ 1.55
HCFC1R1-201ENST00000248089 NCOA7Q8NI08 942 aa24.72■■□□□ 1.55
HCFC1R1-201ENST00000248089 ABHD16BQ9H3Z7 469 aa24.72■■□□□ 1.55
HCFC1R1-201ENST00000248089 PTPDC1A2A3K4 754 aa24.71■■□□□ 1.55
HCFC1R1-201ENST00000248089 ADCYAP1R1P41586 468 aa24.71■■□□□ 1.55
HCFC1R1-201ENST00000248089 SEC23AQ15436 765 aa24.71■■□□□ 1.55
HCFC1R1-201ENST00000248089 CDC37Q16543 378 aaPredicted RBP24.71■■□□□ 1.55
HCFC1R1-201ENST00000248089 STOX1Q6ZVD7 989 aa24.71■■□□□ 1.55
HCFC1R1-201ENST00000248089 RNF180Q86T96 592 aa24.71■■□□□ 1.55
HCFC1R1-201ENST00000248089 FERMT2Q96AC1 680 aa24.71■■□□□ 1.55
HCFC1R1-201ENST00000248089 DDX49Q9Y6V7 483 aaKnown RBP24.71■■□□□ 1.55
HCFC1R1-201ENST00000248089 ASTN1O14525 1302 aa24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 WDR19Q8NEZ3 1342 aa24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 SYNRGQ9UMZ2 1314 aa24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 ERICH2A1L162 156 aa24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 ASB14A6NK59 587 aa24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 IFIT3O14879 490 aaKnown RBP24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 BAATQ14032 418 aaPredicted RBP24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 CCDC144BQ3MJ40 725 aa24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 CHST3Q7LGC8 479 aa24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 ADGRF4Q8IZF3 695 aa24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 PURBQ96QR8 312 aaKnown RBP24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 RBM27Q9P2N5 1060 aaKnown RBP24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 PNMA2Q9UL42 364 aa24.7■■□□□ 1.54
HCFC1R1-201ENST00000248089 NEFLP07196 543 aa24.69■■□□□ 1.54
HCFC1R1-201ENST00000248089 SLC30A10Q6XR72 485 aa24.69■■□□□ 1.54
HCFC1R1-201ENST00000248089 LSG1Q9H089 658 aaKnown RBP24.69■■□□□ 1.54
HCFC1R1-201ENST00000248089 ANO2Q9NQ90 1003 aa24.69■■□□□ 1.54
HCFC1R1-201ENST00000248089 PCDH10Q9P2E7 1040 aa24.69■■□□□ 1.54
HCFC1R1-201ENST00000248089 CALML3P27482 149 aa24.68■■□□□ 1.54
HCFC1R1-201ENST00000248089 RTP1P59025 263 aa24.68■■□□□ 1.54
HCFC1R1-201ENST00000248089 SART3Q15020 963 aaKnown RBP24.68■■□□□ 1.54
HCFC1R1-201ENST00000248089 CLEC4DQ8WXI8 215 aa24.68■■□□□ 1.54
HCFC1R1-201ENST00000248089 VAT1LQ9HCJ6 419 aa24.68■■□□□ 1.54
HCFC1R1-201ENST00000248089 ATP11BQ9Y2G3 1177 aa24.68■■□□□ 1.54
HCFC1R1-201ENST00000248089 ADCY6O43306 1168 aa24.67■■□□□ 1.54
HCFC1R1-201ENST00000248089 ADAMTS4O75173 837 aa24.67■■□□□ 1.54
HCFC1R1-201ENST00000248089 WTAPQ15007 396 aa24.67■■□□□ 1.54
HCFC1R1-201ENST00000248089 RNF207Q6ZRF8 634 aa24.67■■□□□ 1.54
HCFC1R1-201ENST00000248089 STAG2Q8N3U4 1231 aa24.67■■□□□ 1.54
HCFC1R1-201ENST00000248089 KATNBL1Q9H079 304 aa24.67■■□□□ 1.54
HCFC1R1-201ENST00000248089 ADD3Q9UEY8 706 aaKnown RBP24.67■■□□□ 1.54
HCFC1R1-201ENST00000248089 PHF24Q9UPV7 400 aa24.67■■□□□ 1.54
HCFC1R1-201ENST00000248089 DUSP11O75319 330 aaKnown RBP24.66■■□□□ 1.54
HCFC1R1-201ENST00000248089 TMEM67Q5HYA8 995 aa24.66■■□□□ 1.54
HCFC1R1-201ENST00000248089 SLC39A5Q6ZMH5 540 aa24.66■■□□□ 1.54
HCFC1R1-201ENST00000248089 NOL8Q76FK4 1167 aaKnown RBP24.66■■□□□ 1.54
HCFC1R1-201ENST00000248089 EEPD1Q7L9B9 569 aa24.66■■□□□ 1.54
HCFC1R1-201ENST00000248089 SENP2Q9HC62 589 aa24.66■■□□□ 1.54
HCFC1R1-201ENST00000248089 MYADML2A6NDP7 307 aa24.65■■□□□ 1.54
HCFC1R1-201ENST00000248089 C6orf222P0C671 652 aaPredicted RBP24.65■■□□□ 1.54
HCFC1R1-201ENST00000248089 ALDH5A1P51649 535 aaPredicted RBP24.65■■□□□ 1.54
HCFC1R1-201ENST00000248089 QRICH1Q2TAL8 776 aa24.65■■□□□ 1.54
HCFC1R1-201ENST00000248089 FBXO16Q8IX29 292 aaPredicted RBP24.65■■□□□ 1.54
HCFC1R1-201ENST00000248089 MB21D2Q8IYB1 491 aaPredicted RBP24.65■■□□□ 1.54
HCFC1R1-201ENST00000248089 JMJD4Q9H9V9 463 aa24.65■■□□□ 1.54
HCFC1R1-201ENST00000248089 ABCB11O95342 1321 aa24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 A0A1W2PQ45 241 aaPredicted RBP24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 A0A1W2PQY0 241 aa24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 SLC27A2O14975 620 aa24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 SLC34A2O95436 690 aa24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 ANTXR2P58335 489 aa24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 RPS6P62753 249 aaKnown RBP24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 TRIM60Q495X7 471 aa24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 CASC1Q6TDU7 716 aa24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 PRO3102Q9H379 93 aa24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 SPC25Q9HBM1 224 aa24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 MAD2L2Q9UI95 211 aa24.64■■□□□ 1.54
HCFC1R1-201ENST00000248089 BAZ2BQ9UIF8 2168 aaKnown RBP24.64■■□□□ 1.53
HCFC1R1-201ENST00000248089 LTBP2Q14767 1821 aa24.63■■□□□ 1.53
HCFC1R1-201ENST00000248089 KLRF2D3W0D1 207 aa24.63■■□□□ 1.53
HCFC1R1-201ENST00000248089 CDC45O75419 566 aa24.63■■□□□ 1.53
HCFC1R1-201ENST00000248089 MAGEA10P43363 369 aaPredicted RBP24.63■■□□□ 1.53
HCFC1R1-201ENST00000248089 IRX5P78411 483 aaPredicted RBP24.63■■□□□ 1.53
HCFC1R1-201ENST00000248089 TNFAIP2Q03169 654 aa24.63■■□□□ 1.53
HCFC1R1-201ENST00000248089 FBXO11Q86XK2 927 aa24.63■■□□□ 1.53
HCFC1R1-201ENST00000248089 ACLYP53396 1101 aa24.62■■□□□ 1.53
HCFC1R1-201ENST00000248089 GRM4Q14833 912 aa24.62■■□□□ 1.53
HCFC1R1-201ENST00000248089 KCNA10Q16322 511 aa24.62■■□□□ 1.53
HCFC1R1-201ENST00000248089 CREB3L3Q68CJ9 461 aa24.62■■□□□ 1.53
HCFC1R1-201ENST00000248089 PDGFCQ9NRA1 345 aa24.62■■□□□ 1.53
HCFC1R1-201ENST00000248089 PRKAG2Q9UGJ0 569 aa24.62■■□□□ 1.53
HCFC1R1-201ENST00000248089 PRC1O43663 620 aa24.61■■□□□ 1.53
HCFC1R1-201ENST00000248089 FXR1P51114 621 aaKnown RBP eCLIP24.61■■□□□ 1.53
HCFC1R1-201ENST00000248089 SNX17Q15036 470 aa24.61■■□□□ 1.53
HCFC1R1-201ENST00000248089 CATIPQ7Z7H3 387 aa24.61■■□□□ 1.53
HCFC1R1-201ENST00000248089 KLHDC9Q8NEP7 349 aa24.61■■□□□ 1.53
HCFC1R1-201ENST00000248089 GDF15Q99988 308 aa24.61■■□□□ 1.53
HCFC1R1-201ENST00000248089 TSEN34Q9BSV6 310 aaKnown RBP24.61■■□□□ 1.53
HCFC1R1-201ENST00000248089 UPF3AQ9H1J1 476 aaKnown RBP24.61■■□□□ 1.53
HCFC1R1-201ENST00000248089 VTA1Q9NP79 307 aa24.61■■□□□ 1.53
HCFC1R1-201ENST00000248089 PRDM5Q9NQX1 630 aaPredicted RBP24.61■■□□□ 1.53
HCFC1R1-201ENST00000248089 PALM3A6NDB9 673 aaPredicted RBP24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 MOXD2PA6NHM9 499 aa24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 GJA9P57773 515 aa24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 MDM2Q00987 491 aaPredicted RBP24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 TLK2Q86UE8 772 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms