RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 UBR2Q8IWV8 1755 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 NUP98P52948 1817 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 KRT83P78385 493 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 KIF5AQ12840 1032 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 BRD3Q15059 726 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 LRRC41Q15345 812 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 LEKR1Q6ZMV7 388 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 NOA1Q8NC60 698 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 GBP3Q9H0R5 595 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 ACBD3Q9H3P7 528 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 NARFQ9UHQ1 456 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 ZRANB2O95218 330 aaKnown RBP eCLIP14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 CCDC181Q5TID7 509 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 KRT25Q7Z3Z0 450 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 NEK8Q86SG6 692 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 ADSSL1Q8N142 457 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 PLEKHA4Q9H4M7 779 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 TOGARAM1Q9Y4F4 1720 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 BICDL2A1A5D9 508 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 DNM2P50570 870 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 VSNL1P62760 191 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 STK4Q13043 487 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 TRAPPC3LQ5T215 181 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 SV2BQ7L1I2 683 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 C2CD5Q86YS7 1000 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 FAM114A1Q8IWE2 563 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 ARHGEF1Q92888 912 aaKnown RBP14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 LGALS16A8MUM7 142 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 CYTH3O43739 400 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 CAPN2P17655 700 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 EPS15P42566 896 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 CDK8P49336 464 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 GRM4Q14833 912 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 RSRC2Q7L4I2 434 aaKnown RBP14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 MAD2L2Q9UI95 211 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 SAR1BQ9Y6B6 198 aa14.09□□□□□ -0.15
RAB3IP-201ENST00000247833 CALCRLQ16602 461 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 CCDC40Q4G0X9 1142 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 SNX29Q8TEQ0 813 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 P2RX5Q93086 422 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 BARHL2Q9NY43 387 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 LRP6O75581 1613 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 KRT26Q7Z3Y9 468 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 CRACR2AQ9BSW2 395 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 POTEMA6NI47 508 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 USP17L5A8MUK1 530 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 HNRNPH2P55795 449 aaKnown RBP14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 WHAMMP3Q1A5X7 153 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 ZSCAN29Q8IWY8 852 aaPredicted RBP14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 NLRC4Q9NPP4 1024 aa14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 THRAP3Q9Y2W1 955 aaKnown RBP14.08□□□□□ -0.16
RAB3IP-201ENST00000247833 MYH3P11055 1940 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 FAM170AA1A519 330 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 USO1O60763 962 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 EEF1GP26641 437 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 GTF2IP78347 998 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 SBK1Q52WX2 424 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 ANKRD40Q6AI12 368 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 GJA10Q969M2 543 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 HAUS4Q9H6D7 363 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 NID2Q14112 1375 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 STXBP3O00186 592 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 ZBTB22O15209 634 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 RPS6KA4O75676 772 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 ATP1A1P05023 1023 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 KRT79Q5XKE5 535 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 FAM196AQ6ZSG2 479 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 FUT8Q9BYC5 575 aa14.07□□□□□ -0.16
RAB3IP-201ENST00000247833 N4BP1O75113 896 aaKnown RBP14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 PBX1P40424 430 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 CACNB1Q02641 598 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 TAF3Q5VWG9 929 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 CNNM4Q6P4Q7 775 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 RRAGAQ7L523 313 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 NELFCDQ8IXH7 590 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 GSPT2Q8IYD1 628 aaKnown RBP14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 TXLNBQ8N3L3 684 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 SMCR8Q8TEV9 937 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 RAB34Q9BZG1 259 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 FAN1Q9Y2M0 1017 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 SLIT2O94813 1529 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 RASA1P20936 1047 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 SLC16A2P36021 539 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 RBM5P52756 815 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 NAALADL2Q58DX5 795 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 NHEJ1Q9H9Q4 299 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 GGA1Q9UJY5 639 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 DUSP10Q9Y6W6 482 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 CCNE1P24864 410 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 CXCR5P32302 372 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 UBE2SQ16763 222 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 TRIM9Q9C026 710 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 ANKZF1Q9H8Y5 726 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 BMP2KQ9NSY1 1161 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 ADAM21Q9UKJ8 722 aa14.06□□□□□ -0.16
RAB3IP-201ENST00000247833 ITIH6Q6UXX5 1313 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms