RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 MEIS2O14770 477 aa14.76□□□□□ -0.05
HIF3A-201ENST00000244302 WDR46O15213 610 aaKnown RBP14.76□□□□□ -0.05
HIF3A-201ENST00000244302 CST9Q5W186 159 aa14.76□□□□□ -0.05
HIF3A-201ENST00000244302 USP49Q70CQ1 688 aa14.76□□□□□ -0.05
HIF3A-201ENST00000244302 DAGLBQ8NCG7 672 aa14.76□□□□□ -0.05
HIF3A-201ENST00000244302 CHURC1Q8WUH1 139 aa14.76□□□□□ -0.05
HIF3A-201ENST00000244302 AS3MTQ9HBK9 375 aa14.76□□□□□ -0.05
HIF3A-201ENST00000244302 CENPFP49454 3210 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 CCDC194A0A1B0GVG4 234 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 NF2P35240 595 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 IL17AQ16552 155 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 RILPL1Q5EBL4 403 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 TTC38Q5R3I4 469 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 ANKRD13AQ8IZ07 590 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 TBCKQ8TEA7 893 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 LPAR1Q92633 364 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 GJA10Q969M2 543 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 OPTNQ96CV9 577 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 SLF1Q9BQI6 1058 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 TMEM60Q9H2L4 133 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 RIC8AQ9NPQ8 531 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.75□□□□□ -0.05
HIF3A-201ENST00000244302 HOMER2Q9NSB8 354 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 GINM1Q9NU53 330 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 RIPK3Q9Y572 518 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 OTOFQ9HC10 1997 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 CELF2O95319 508 aaKnown RBP14.75□□□□□ -0.05
HIF3A-201ENST00000244302 YEATS4O95619 227 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 GNA11P29992 359 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 CLK2P49760 499 aaKnown RBP14.75□□□□□ -0.05
HIF3A-201ENST00000244302 CAMK4Q16566 473 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 CCAR1Q8IX12 1150 aaKnown RBP14.75□□□□□ -0.05
HIF3A-201ENST00000244302 REXO1Q8N1G1 1221 aaKnown RBP14.75□□□□□ -0.05
HIF3A-201ENST00000244302 PRPF38AQ8NAV1 312 aaKnown RBP14.75□□□□□ -0.05
HIF3A-201ENST00000244302 BICD2Q8TD16 824 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 R3HDMLQ9H3Y0 253 aa14.75□□□□□ -0.05
HIF3A-201ENST00000244302 MBD3O95983 291 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 PTGDRQ13258 359 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 LETM2Q2VYF4 491 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 LDLRAD1Q5T700 205 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 SHC4Q6S5L8 630 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 ERCC4Q92889 916 aaPredicted RBP14.74□□□□□ -0.05
HIF3A-201ENST00000244302 PURBQ96QR8 312 aaKnown RBP14.74□□□□□ -0.05
HIF3A-201ENST00000244302 DACT1Q9NYF0 836 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 PPP1R9AQ9ULJ8 1098 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 GOLGA6L4A6NEF3 574 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 ITGBL1O95965 494 aaPredicted RBP14.74□□□□□ -0.05
HIF3A-201ENST00000244302 USP14P54578 494 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 MAP3K11Q16584 847 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 MUM1L1Q5H9M0 696 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 ATL3Q6DD88 541 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 GADL1Q6ZQY3 521 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 ZSCAN30Q86W11 494 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 C4orf32Q8N8J7 132 aa14.74□□□□□ -0.05
HIF3A-201ENST00000244302 ESYT2A0FGR8 921 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 VWA5AO00534 786 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 NFIBO00712 420 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 TDP2O95551 362 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 CFBP00751 764 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 CDC25AP30304 524 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 NDUFA8P51970 172 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 UBXN2AP68543 259 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 SNW1Q13573 536 aaKnown RBP14.73□□□□□ -0.05
HIF3A-201ENST00000244302 CATSPERGQ6ZRH7 1159 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 FAM160B2Q86V87 743 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 FCHSD1Q86WN1 690 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 CCDC12Q8WUD4 166 aaPredicted RBP14.73□□□□□ -0.05
HIF3A-201ENST00000244302 CUL5Q93034 780 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 SLC38A10Q9HBR0 1119 aa14.73□□□□□ -0.05
HIF3A-201ENST00000244302 FBXO2Q9UK22 296 aaPredicted RBP14.73□□□□□ -0.05
HIF3A-201ENST00000244302 SPDYE5A6NIY4 337 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 C19orf81C9J6K1 198 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 PLA2G6O60733 806 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 MOGSQ13724 837 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 ARMC9Q7Z3E5 817 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 ERO1BQ86YB8 467 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 FSIP1Q8NA03 581 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 C12orf42Q96LP6 360 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 CCPG1Q9ULG6 757 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 PAPPA2Q9BXP8 1791 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 SYCE3A1L190 88 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 CCNT1O60563 726 aaKnown RBP14.72□□□□□ -0.05
HIF3A-201ENST00000244302 ALAS1P13196 640 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 MRPL12P52815 198 aaKnown RBP14.72□□□□□ -0.05
HIF3A-201ENST00000244302 NONOQ15233 471 aaKnown RBP eCLIP14.72□□□□□ -0.05
HIF3A-201ENST00000244302 ADALQ6DHV7 355 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 GALNT17Q6IS24 598 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 KCNG4Q8TDN1 519 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 CSRNP2Q9H175 543 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 TMOD4Q9NZQ9 345 aa14.72□□□□□ -0.05
HIF3A-201ENST00000244302 A0A087WWV3 80 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 SLC37A4O43826 429 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
HIF3A-201ENST00000244302 DSG3P32926 999 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 PPATQ06203 517 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 TMEM132BQ14DG7 1078 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 CSPP1Q1MSJ5 1256 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 SH3D19Q5HYK7 790 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms