RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 COPB2P35606 906 aa10.72□□□□□ -0.69
TGFB3-201ENST00000238682 METAP2P50579 478 aaKnown RBP eCLIP10.72□□□□□ -0.69
TGFB3-201ENST00000238682 GRM4Q14833 912 aa10.72□□□□□ -0.69
TGFB3-201ENST00000238682 RRP12Q5JTH9 1297 aaKnown RBP10.72□□□□□ -0.69
TGFB3-201ENST00000238682 GADL1Q6ZQY3 521 aa10.72□□□□□ -0.69
TGFB3-201ENST00000238682 CYP2D7A0A087X1C5 515 aa10.72□□□□□ -0.69
TGFB3-201ENST00000238682 FSD2A1L4K1 749 aa10.72□□□□□ -0.69
TGFB3-201ENST00000238682 FMNL1O95466 1100 aaPredicted RBP10.72□□□□□ -0.69
TGFB3-201ENST00000238682 GJB1P08034 283 aa10.72□□□□□ -0.69
TGFB3-201ENST00000238682 IFNAR1P17181 557 aa10.72□□□□□ -0.69
TGFB3-201ENST00000238682 RAB3GAP1Q15042 981 aa10.72□□□□□ -0.69
TGFB3-201ENST00000238682 ME3Q16798 604 aa10.72□□□□□ -0.69
TGFB3-201ENST00000238682 GPATCH4Q5T3I0 446 aaKnown RBP10.72□□□□□ -0.69
TGFB3-201ENST00000238682 SMCR8Q8TEV9 937 aaPredicted RBP10.72□□□□□ -0.69
TGFB3-201ENST00000238682 ZNF236Q9UL36 1845 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 GOLGA8BA8MQT2 603 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 VGLL3A8MV65 326 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 SNHG28P0DPA3 235 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 PYGBP11216 843 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 XRCC5P13010 732 aaKnown RBP10.71□□□□□ -0.69
TGFB3-201ENST00000238682 BACE1P56817 501 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 CCNA1P78396 465 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 ZFPM1Q8IX07 1006 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 CTCFLQ8NI51 663 aaPredicted RBP10.71□□□□□ -0.69
TGFB3-201ENST00000238682 PMM1Q92871 262 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 DYNLL2Q96FJ2 89 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 GMCL1Q96IK5 515 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 RNF26Q9BY78 433 aaPredicted RBP10.71□□□□□ -0.69
TGFB3-201ENST00000238682 VRTNQ9H8Y1 702 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 SMC3Q9UQE7 1217 aa10.71□□□□□ -0.69
TGFB3-201ENST00000238682 A0A1W2PPC1 479 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 GOLGA8AA7E2F4 631 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 RECKO95980 971 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 FDX1P10109 184 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 MRE11P49959 708 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 RTN1Q16799 776 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 FANCBQ8NB91 859 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 KIAA1683Q9H0B3 1180 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 DNAJC18Q9H819 358 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 IL17RBQ9NRM6 502 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 ZBTB21Q9ULJ3 1066 aa10.71□□□□□ -0.7
TGFB3-201ENST00000238682 PTPRFP10586 1907 aa10.7□□□□□ -0.7
TGFB3-201ENST00000238682 USP17L10C9JJH3 530 aa10.7□□□□□ -0.7
TGFB3-201ENST00000238682 GJA8P48165 433 aa10.7□□□□□ -0.7
TGFB3-201ENST00000238682 APOBRQ0VD83 1088 aa10.7□□□□□ -0.7
TGFB3-201ENST00000238682 TROAPQ12815 778 aa10.7□□□□□ -0.7
TGFB3-201ENST00000238682 SLC4A8Q2Y0W8 1093 aa10.7□□□□□ -0.7
TGFB3-201ENST00000238682 TRIM22Q8IYM9 498 aa10.7□□□□□ -0.7
TGFB3-201ENST00000238682 PNMA1Q8ND90 353 aa10.7□□□□□ -0.7
TGFB3-201ENST00000238682 LPAR1Q92633 364 aa10.7□□□□□ -0.7
TGFB3-201ENST00000238682 CPLX1O14810 134 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.69□□□□□ -0.7
TGFB3-201ENST00000238682 SPZ1Q9BXG8 430 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 SH3GLB2Q9NR46 395 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 CPA4Q9UI42 421 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 MGAMO43451 1857 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 CCDC66A2RUB6 948 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 TTC36A6NLP5 189 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 USP17L15C9J2P7 530 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 USP17L13C9JLJ4 530 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 USP17L11C9JVI0 530 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 USP17L18D6R9N7 530 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 USP17L22D6RA61 530 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 USP17L17D6RBQ6 530 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 USP17L19D6RCP7 530 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 USP17L20D6RJB6 530 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 TNPO2O14787 897 aaKnown RBP10.69□□□□□ -0.7
TGFB3-201ENST00000238682 AKR1B1P15121 316 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 USP17L24Q0WX57 530 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 PKP1Q13835 747 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 EGFL6Q8IUX8 553 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 MB21D1Q8N884 522 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 SHCBP1Q8NEM2 672 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 TMEM47Q9BQJ4 181 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 TMX2Q9Y320 296 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 RABGAP1Q9Y3P9 1069 aa10.69□□□□□ -0.7
TGFB3-201ENST00000238682 PRPF3O43395 683 aaKnown RBP10.68□□□□□ -0.7
TGFB3-201ENST00000238682 HMGCRP04035 888 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 CPA1P15085 419 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 XBP1P17861 261 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 ICA1Q05084 483 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 SCRN1Q12765 414 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 MCTP2Q6DN12 878 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 GALNT17Q6IS24 598 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 CEP95Q96GE4 821 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 GLT8D2Q9H1C3 349 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 ATP6V1DQ9Y5K8 247 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 RPS6KL1Q9Y6S9 549 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 UTRNP46939 3433 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 MYH4Q9Y623 1939 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 PALM3A6NDB9 673 aaPredicted RBP10.68□□□□□ -0.7
TGFB3-201ENST00000238682 DEXIO95424 95 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 FAM47AQ5JRC9 791 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 ATL3Q6DD88 541 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 PPP1R18Q6NYC8 613 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 CLEC17AQ6ZS10 378 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 TMTC3Q6ZXV5 915 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 GPRC5AQ8NFJ5 357 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 NRBP1Q9UHY1 535 aa10.68□□□□□ -0.7
TGFB3-201ENST00000238682 PRDM1O75626 825 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms