RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 DCAF4Q8WV16 495 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 DBNDD2Q9BQY9 259 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 MKNK2Q9HBH9 465 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 SAP30BPQ9UHR5 308 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 NOB1Q9ULX3 412 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 PA2G4Q9UQ80 394 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 MTCH2Q9Y6C9 303 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 CCER2I3L3R5 266 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 TLL1O43897 1013 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 CSF2RAP15509 400 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 RRP1BQ14684 758 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ZYXQ15942 572 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 SLC9C2Q5TAH2 1124 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 MCTP2Q6DN12 878 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ERMP1Q7Z2K6 904 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 SUGP1Q8IWZ8 645 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ZNF384Q8TF68 577 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 MEIS3Q99687 375 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ALDH8A1Q9H2A2 487 aaPredicted RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 UBE2ZQ9H832 354 aaPredicted RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 INSL6Q9Y581 213 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 TTLL1O95922 423 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 PGK1P00558 417 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 GNAT1P11488 350 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 SELPP16109 830 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 SDHBP21912 280 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 CDK8P49336 464 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 RARSP54136 660 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 TTLL4Q14679 1199 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 IER5LQ5T953 404 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 PDE12Q6L8Q7 609 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 SH3RF1Q7Z6J0 888 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ZNF710Q8N1W2 664 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 NEDD1Q8NHV4 660 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ZBED2Q9BTP6 218 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 PIH1D3Q9NQM4 214 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ATP5JP18859 108 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 GUCY1A2P33402 732 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 IKBKEQ14164 716 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 PPP2R5BQ15173 497 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 POTEEQ6S8J3 1075 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 TBC1D9Q6ZT07 1266 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 MCF2L2Q86YR7 1114 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 CDCA3Q99618 268 aaPredicted RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 RNF146Q9NTX7 359 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 FOCADQ5VW36 1801 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 SPDYE4A6NLX3 237 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 SNAI1O95863 264 aaPredicted RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 CXCL10P02778 98 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 CASTP20810 708 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 SSTR3P32745 418 aaPredicted RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 PTK7Q13308 1070 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 CCDC144BQ3MJ40 725 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 LRRC47Q8N1G4 583 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 SEPT8Q92599 483 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 PLVAPQ9BX97 442 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 FTOQ9C0B1 505 aaKnown RBP eCLIP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 DOCK3Q8IZD9 2030 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 F5H6K3 240 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 EEF2P13639 858 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 STAT2P52630 851 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 EPHB4P54760 987 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 KLRC3Q07444 240 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 SLFN13Q68D06 897 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 AACSQ86V21 672 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 ADHFE1Q8IWW8 467 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 FAM178BQ8IXR5 827 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 MRPL38Q96DV4 380 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 SNX27Q96L92 541 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 IWS1Q96ST2 819 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 C11orf84Q9BUA3 381 aaPredicted RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 PPP1R12CQ9BZL4 782 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 CCDC8Q9H0W5 538 aaPredicted RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 NSUN3Q9H649 340 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 STK39Q9UEW8 545 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 DBNLQ9UJU6 430 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 GNEQ9Y223 722 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 NDUFB10O96000 172 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 GH1P01241 217 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 AKR1B1P15121 316 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 ADD2P35612 726 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 MFAP1P55081 439 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 SMAD4Q13485 552 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 BMS1Q14692 1282 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 RSPH3Q86UC2 560 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 USP38Q8NB14 1042 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 PABPC5Q96DU9 382 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 TMEM121BQ9BXQ6 578 aaPredicted RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 SNRKQ9NRH2 765 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 A6NJR5 290 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 CYP2C18P33260 490 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 DYNLL1P63167 89 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 PDE4DQ08499 809 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 COL19A1Q14993 1142 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 FAM83BQ5T0W9 1011 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 GPATCH4Q5T3I0 446 aaKnown RBP2.71□□□□□ -1.98
PRKD3-201ENST00000234179 XRRA1Q6P2D8 792 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 ELMSAN1Q6PJG2 1045 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 BTNL9Q6UXG8 535 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms