RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MAMDC4Q6UXC1 1216 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 DHX32Q7L7V1 743 aaKnown RBP16.04■□□□□ 0.16
VEGFA-201ENST00000230480 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 ZNF654Q8IZM8 581 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 TMEM87BQ96K49 555 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 CYP39A1Q9NYL5 469 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 CCPG1Q9ULG6 757 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 LRRC37A2A6NM11 1700 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 ADCY6O43306 1168 aa16.03■□□□□ 0.16
VEGFA-201ENST00000230480 EPB41L2O43491 1005 aaKnown RBP16.03■□□□□ 0.16
VEGFA-201ENST00000230480 FUT2Q10981 343 aa16.03■□□□□ 0.16
VEGFA-201ENST00000230480 CDC37Q16543 378 aaPredicted RBP16.03■□□□□ 0.16
VEGFA-201ENST00000230480 CASC1Q6TDU7 716 aa16.03■□□□□ 0.16
VEGFA-201ENST00000230480 TRMT44Q8IYL2 757 aaKnown RBP16.03■□□□□ 0.16
VEGFA-201ENST00000230480 SRBD1Q8N5C6 995 aaKnown RBP16.03■□□□□ 0.16
VEGFA-201ENST00000230480 TINF2Q9BSI4 451 aa16.03■□□□□ 0.16
VEGFA-201ENST00000230480 TMEM106CQ9BVX2 250 aa16.03■□□□□ 0.16
VEGFA-201ENST00000230480 AGXT2Q9BYV1 514 aa16.03■□□□□ 0.16
VEGFA-201ENST00000230480 ACAD9Q9H845 621 aa16.03■□□□□ 0.16
VEGFA-201ENST00000230480 VAT1LQ9HCJ6 419 aa16.03■□□□□ 0.16
VEGFA-201ENST00000230480 HMX1Q9NP08 348 aaPredicted RBP16.03■□□□□ 0.16
VEGFA-201ENST00000230480 COL20A1Q9P218 1284 aa16.03■□□□□ 0.16
VEGFA-201ENST00000230480 OGDHLQ9ULD0 1010 aa16.03■□□□□ 0.16
VEGFA-201ENST00000230480 PLEKHA8P1O95397 391 aa16.02■□□□□ 0.16
VEGFA-201ENST00000230480 BAATQ14032 418 aaPredicted RBP16.02■□□□□ 0.16
VEGFA-201ENST00000230480 TMEM63BQ5T3F8 832 aa16.02■□□□□ 0.16
VEGFA-201ENST00000230480 CMTR1Q8N1G2 835 aaKnown RBP16.02■□□□□ 0.16
VEGFA-201ENST00000230480 DIS3LQ8TF46 1054 aaKnown RBP16.02■□□□□ 0.16
VEGFA-201ENST00000230480 IL17RAQ96F46 866 aa16.02■□□□□ 0.16
VEGFA-201ENST00000230480 PIGSQ96S52 555 aa16.02■□□□□ 0.16
VEGFA-201ENST00000230480 MAP3K14Q99558 947 aa16.02■□□□□ 0.16
VEGFA-201ENST00000230480 FBXO40Q9UH90 709 aa16.02■□□□□ 0.16
VEGFA-201ENST00000230480 PTGS1P23219 599 aa16.01■□□□□ 0.15
VEGFA-201ENST00000230480 IRX5P78411 483 aaPredicted RBP16.01■□□□□ 0.15
VEGFA-201ENST00000230480 C8orf34Q49A92 452 aa16.01■□□□□ 0.15
VEGFA-201ENST00000230480 RNF20Q5VTR2 975 aa16.01■□□□□ 0.15
VEGFA-201ENST00000230480 SLC30A10Q6XR72 485 aa16.01■□□□□ 0.15
VEGFA-201ENST00000230480 ZNF467Q7Z7K2 595 aaPredicted RBP16.01■□□□□ 0.15
VEGFA-201ENST00000230480 FBXL16Q8N461 479 aa16.01■□□□□ 0.15
VEGFA-201ENST00000230480 MORC4Q8TE76 937 aa16.01■□□□□ 0.15
VEGFA-201ENST00000230480 CWC22Q9HCG8 908 aaKnown RBP16.01■□□□□ 0.15
VEGFA-201ENST00000230480 DDAH1O94760 285 aa16■□□□□ 0.15
VEGFA-201ENST00000230480 REC8O95072 547 aa16■□□□□ 0.15
VEGFA-201ENST00000230480 GHRHRQ02643 423 aa16■□□□□ 0.15
VEGFA-201ENST00000230480 MFSD14CQ5VZR4 134 aa16■□□□□ 0.15
VEGFA-201ENST00000230480 APOA5Q6Q788 366 aa16■□□□□ 0.15
VEGFA-201ENST00000230480 ANKRD35Q8N283 1001 aa16■□□□□ 0.15
VEGFA-201ENST00000230480 DDX11Q96FC9 970 aa16■□□□□ 0.15
VEGFA-201ENST00000230480 JAKMIP1Q96N16 626 aaKnown RBP16■□□□□ 0.15
VEGFA-201ENST00000230480 ZSWIM6Q9HCJ5 1215 aa16■□□□□ 0.15
VEGFA-201ENST00000230480 RPS6KB1P23443 525 aa15.99■□□□□ 0.15
VEGFA-201ENST00000230480 CDC27P30260 824 aa15.99■□□□□ 0.15
VEGFA-201ENST00000230480 RPS6P62753 249 aaKnown RBP15.99■□□□□ 0.15
VEGFA-201ENST00000230480 TOB2Q14106 344 aaPredicted RBP15.99■□□□□ 0.15
VEGFA-201ENST00000230480 USH1GQ495M9 461 aa15.99■□□□□ 0.15
VEGFA-201ENST00000230480 ANO1Q5XXA6 986 aa15.99■□□□□ 0.15
VEGFA-201ENST00000230480 CATIPQ7Z7H3 387 aa15.99■□□□□ 0.15
VEGFA-201ENST00000230480 CCDC144CPQ8IYA2 1237 aa15.99■□□□□ 0.15
VEGFA-201ENST00000230480 NUP133Q8WUM0 1156 aa15.99■□□□□ 0.15
VEGFA-201ENST00000230480 LENG1Q96BZ8 264 aaPredicted RBP15.99■□□□□ 0.15
VEGFA-201ENST00000230480 DDX20Q9UHI6 824 aaKnown RBP15.99■□□□□ 0.15
VEGFA-201ENST00000230480 ERICH2A1L162 156 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 POTEB2H3BUK9 544 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 ZBTB5O15062 677 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 COL6A1P12109 1028 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 SMARCA1P28370 1054 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 EVCP57679 992 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 KRT32Q14532 448 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 SART3Q15020 963 aaKnown RBP15.98■□□□□ 0.15
VEGFA-201ENST00000230480 TAPT1Q6NXT6 567 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 NSMFQ6X4W1 530 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 Q6ZUG5 572 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 TMTC3Q6ZXV5 915 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 ARMCX2Q7L311 632 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 TMTC2Q8N394 836 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 MSL3Q8N5Y2 521 aaKnown RBP15.98■□□□□ 0.15
VEGFA-201ENST00000230480 FANCBQ8NB91 859 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 RGS22Q8NE09 1264 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 SYTL5Q8TDW5 730 aaPredicted RBP15.98■□□□□ 0.15
VEGFA-201ENST00000230480 SPZ1Q9BXG8 430 aa15.98■□□□□ 0.15
VEGFA-201ENST00000230480 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.98■□□□□ 0.15
VEGFA-201ENST00000230480 CTDP1Q9Y5B0 961 aaPredicted RBP15.98■□□□□ 0.15
VEGFA-201ENST00000230480 PFASO15067 1338 aa15.97■□□□□ 0.15
VEGFA-201ENST00000230480 SYNGAP1Q96PV0 1343 aa15.97■□□□□ 0.15
VEGFA-201ENST00000230480 hCG_1642624A0A1W2PR95 340 aa15.97■□□□□ 0.15
VEGFA-201ENST00000230480 CTAGE5O15320 804 aa15.97■□□□□ 0.15
VEGFA-201ENST00000230480 SEPT4O43236 478 aa15.97■□□□□ 0.15
VEGFA-201ENST00000230480 EDNRBP24530 442 aa15.97■□□□□ 0.15
VEGFA-201ENST00000230480 APOBRQ0VD83 1088 aa15.97■□□□□ 0.15
VEGFA-201ENST00000230480 FBXO11Q86XK2 927 aa15.97■□□□□ 0.15
VEGFA-201ENST00000230480 PAWRQ96IZ0 340 aaKnown RBP15.97■□□□□ 0.15
VEGFA-201ENST00000230480 TAAR1Q96RJ0 339 aa15.97■□□□□ 0.15
VEGFA-201ENST00000230480 PDGFCQ9NRA1 345 aa15.97■□□□□ 0.15
VEGFA-201ENST00000230480 PNMA6FA0A0J9YX94 578 aa15.96■□□□□ 0.15
VEGFA-201ENST00000230480 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.96■□□□□ 0.15
VEGFA-201ENST00000230480 TFRCP02786 760 aaKnown RBP15.96■□□□□ 0.15
VEGFA-201ENST00000230480 TYW1BQ6NUM6 668 aa15.96■□□□□ 0.15
VEGFA-201ENST00000230480 TM6SF1Q9BZW5 370 aa15.96■□□□□ 0.15
VEGFA-201ENST00000230480 SLC5A4Q9NY91 659 aa15.96■□□□□ 0.15
VEGFA-201ENST00000230480 NRBP1Q9UHY1 535 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms