RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 PAXBP1Q9Y5B6 917 aa21.61■■□□□ 1.05
YBX3-201ENST00000228251 CABP7Q86V35 215 aa21.61■■□□□ 1.05
YBX3-201ENST00000228251 POTEDQ86YR6 584 aa21.61■■□□□ 1.05
YBX3-201ENST00000228251 PPP1R13BQ96KQ4 1090 aa21.61■■□□□ 1.05
YBX3-201ENST00000228251 KIF13BQ9NQT8 1826 aa21.6■■□□□ 1.05
YBX3-201ENST00000228251 LRRC10BA6NIK2 292 aa21.6■■□□□ 1.05
YBX3-201ENST00000228251 ZBTB5O15062 677 aa21.6■■□□□ 1.05
YBX3-201ENST00000228251 TCP10Q12799 353 aa21.6■■□□□ 1.05
YBX3-201ENST00000228251 CEP135Q66GS9 1140 aa21.6■■□□□ 1.05
YBX3-201ENST00000228251 TRMT1Q9NXH9 659 aaKnown RBP21.6■■□□□ 1.05
YBX3-201ENST00000228251 LIMA1Q9UHB6 759 aaKnown RBP21.6■■□□□ 1.05
YBX3-201ENST00000228251 FAM196BA6NMK8 535 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 MPHOSPH10O00566 681 aaKnown RBP21.59■■□□□ 1.05
YBX3-201ENST00000228251 TEX33O43247 280 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 RHOBTB3O94955 611 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 PLCG1P19174 1290 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 FXR2P51116 673 aaKnown RBP eCLIP21.59■■□□□ 1.05
YBX3-201ENST00000228251 PTPN14Q15678 1187 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 ADSSL1Q8N142 457 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 KANSL2Q9H9L4 492 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 COL4A5P29400 1685 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 USP17L10C9JJH3 530 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 ENTPD3O75355 529 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 EEF2P13639 858 aaKnown RBP21.59■■□□□ 1.05
YBX3-201ENST00000228251 PRCPP42785 496 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 GOLGA8FQ08AF8 430 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 GOLGA8DPQ0D2H9 430 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 PAK1Q13153 545 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 CERKLQ49MI3 558 aaPredicted RBP21.59■■□□□ 1.05
YBX3-201ENST00000228251 FCHSD1Q86WN1 690 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 SUPT20HQ8NEM7 779 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 DCAF4Q8WV16 495 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 STK32BQ9NY57 414 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 ZNF219Q9P2Y4 722 aaPredicted RBP21.59■■□□□ 1.05
YBX3-201ENST00000228251 GDAQ9Y2T3 454 aa21.59■■□□□ 1.05
YBX3-201ENST00000228251 SLC37A4O43826 429 aa21.58■■□□□ 1.04
YBX3-201ENST00000228251 NRDCO43847 1150 aa21.58■■□□□ 1.04
YBX3-201ENST00000228251 SLC16A2P36021 539 aa21.58■■□□□ 1.04
YBX3-201ENST00000228251 EN1Q05925 392 aaPredicted RBP21.58■■□□□ 1.04
YBX3-201ENST00000228251 KMT5BQ4FZB7 885 aa21.58■■□□□ 1.04
YBX3-201ENST00000228251 KCTD1Q719H9 257 aa21.58■■□□□ 1.04
YBX3-201ENST00000228251 CTAGE1Q96RT6 745 aa21.58■■□□□ 1.04
YBX3-201ENST00000228251 ATF5Q9Y2D1 282 aaPredicted RBP21.58■■□□□ 1.04
YBX3-201ENST00000228251 KIF2AO00139 706 aaPredicted RBP21.57■■□□□ 1.04
YBX3-201ENST00000228251 CCDC96Q2M329 555 aa21.57■■□□□ 1.04
YBX3-201ENST00000228251 PPP4R3AQ6IN85 833 aa21.57■■□□□ 1.04
YBX3-201ENST00000228251 GIMAP8Q8ND71 665 aaPredicted RBP21.57■■□□□ 1.04
YBX3-201ENST00000228251 NELFBQ8WX92 580 aa21.57■■□□□ 1.04
YBX3-201ENST00000228251 TDP2O95551 362 aa21.56■■□□□ 1.04
YBX3-201ENST00000228251 RBM5P52756 815 aaKnown RBP eCLIP21.56■■□□□ 1.04
YBX3-201ENST00000228251 TMEM179Q6ZVK1 233 aa21.56■■□□□ 1.04
YBX3-201ENST00000228251 TSC1Q92574 1164 aa21.56■■□□□ 1.04
YBX3-201ENST00000228251 C7orf25Q9BPX7 421 aa21.56■■□□□ 1.04
YBX3-201ENST00000228251 ARHGAP6O43182 974 aa21.56■■□□□ 1.04
YBX3-201ENST00000228251 TECP42680 631 aa21.56■■□□□ 1.04
YBX3-201ENST00000228251 IRF2BP1Q8IU81 584 aa21.56■■□□□ 1.04
YBX3-201ENST00000228251 ZNF710Q8N1W2 664 aa21.56■■□□□ 1.04
YBX3-201ENST00000228251 CUL5Q93034 780 aa21.56■■□□□ 1.04
YBX3-201ENST00000228251 PRMT6Q96LA8 375 aaPredicted RBP21.56■■□□□ 1.04
YBX3-201ENST00000228251 TRIM9Q9C026 710 aa21.56■■□□□ 1.04
YBX3-201ENST00000228251 TDRD3Q9H7E2 651 aaKnown RBP21.56■■□□□ 1.04
YBX3-201ENST00000228251 ITIH6Q6UXX5 1313 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 STX10O60499 249 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 JAG1P78504 1218 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 ATP2B2Q01814 1243 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 GRB10Q13322 594 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 SEPT2Q15019 361 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 KRT31Q15323 416 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 CALCRLQ16602 461 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 UBE2SQ16763 222 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 REXO1L1PQ8IX06 675 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 GMCL1P1Q8NEA9 526 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 GMLQ99445 158 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 PLIN2Q99541 437 aa21.55■■□□□ 1.04
YBX3-201ENST00000228251 SPAG1Q07617 926 aa21.54■■□□□ 1.04
YBX3-201ENST00000228251 PDIA5Q14554 519 aa21.54■■□□□ 1.04
YBX3-201ENST00000228251 GRIPAP1Q4V328 841 aa21.54■■□□□ 1.04
YBX3-201ENST00000228251 SLFN13Q68D06 897 aa21.54■■□□□ 1.04
YBX3-201ENST00000228251 PNMA5Q96PV4 448 aa21.54■■□□□ 1.04
YBX3-201ENST00000228251 BLOC1S4Q9NUP1 217 aa21.54■■□□□ 1.04
YBX3-201ENST00000228251 PPIP5K2O43314 1243 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 MRPL12P52815 198 aaKnown RBP21.53■■□□□ 1.04
YBX3-201ENST00000228251 RRP1BQ14684 758 aaKnown RBP21.53■■□□□ 1.04
YBX3-201ENST00000228251 QRICH1Q2TAL8 776 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 COBLL1Q53SF7 1204 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 GMCL1Q96IK5 515 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 BAG1Q99933 345 aaPredicted RBP21.53■■□□□ 1.04
YBX3-201ENST00000228251 PDGFDQ9GZP0 370 aaPredicted RBP21.53■■□□□ 1.04
YBX3-201ENST00000228251 RRP9O43818 475 aaKnown RBP21.53■■□□□ 1.04
YBX3-201ENST00000228251 C21orf2O43822 256 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 COBLO75128 1261 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 TUBB4AP04350 444 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 FECHP22830 423 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 TXKP42681 527 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 PMS1P54277 932 aaKnown RBP21.53■■□□□ 1.04
YBX3-201ENST00000228251 ICA1Q05084 483 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 TCP11X2Q5H9J9 407 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 RASSF8Q8NHQ8 419 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 PANX2Q96RD6 677 aa21.53■■□□□ 1.04
YBX3-201ENST00000228251 PSMD1Q99460 953 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms