RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 SENP2Q9HC62 589 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 ZNF185O15231 689 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 CKAP4Q07065 602 aaKnown RBP12.81□□□□□ -0.36
CCND1-201ENST00000227507 IQCEQ6IPM2 695 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 SDR42E1Q8WUS8 393 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 SELENOOQ9BVL4 669 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 UBXN6Q9BZV1 441 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 CYP27A1Q02318 531 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 CTDSPL2Q05D32 466 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 TUBB2AQ13885 445 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 CRAMP1Q96RY5 1269 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 TUBB2BQ9BVA1 445 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 PXDNLA1KZ92 1463 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 GOLGA6L7A0A1B0GV03 622 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 TRIM75PA6NK02 468 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 HNRNPH1P31943 449 aaKnown RBP12.8□□□□□ -0.36
CCND1-201ENST00000227507 NBPF20Q3BBV1 942 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 HEATR3Q7Z4Q2 680 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 GPR101Q96P66 508 aaPredicted RBP12.8□□□□□ -0.36
CCND1-201ENST00000227507 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 USP17L3A6NCW0 530 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 USP17L4A6NCW7 530 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 NEBLO76041 1014 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 PPARAQ07869 468 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 CIAPIN1Q6FI81 312 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 APOA5Q6Q788 366 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 USP17L1Q7RTZ2 530 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 SP8Q8IXZ3 490 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 ZHX3Q9H4I2 956 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 SLC24A3Q9HC58 644 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 ATP1A1P05023 1023 aaKnown RBP12.8□□□□□ -0.36
CCND1-201ENST00000227507 HLTFQ14527 1009 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCND1-201ENST00000227507 NR1I3Q14994 352 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 TMEM266Q2M3C6 531 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 ANKRD13CQ8N6S4 541 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 CCDC114Q96M63 670 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 ATP8A2Q9NTI2 1148 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
CCND1-201ENST00000227507 MYO1FO00160 1098 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 OPA1O60313 960 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 PARP1P09874 1014 aaKnown RBP12.79□□□□□ -0.36
CCND1-201ENST00000227507 CHRNA5P30532 468 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 PAFAH1B1P43034 410 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 IRAK1P51617 712 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 PODNQ7Z5L7 613 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 CEP120Q8N960 986 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCND1-201ENST00000227507 RRP36Q96EU6 259 aaKnown RBP12.79□□□□□ -0.36
CCND1-201ENST00000227507 TRIM47Q96LD4 638 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.79□□□□□ -0.36
CCND1-201ENST00000227507 PLSCR1O15162 318 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 NAPAP54920 295 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 ACTN3Q08043 901 aaPredicted RBP12.79□□□□□ -0.36
CCND1-201ENST00000227507 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 COG1Q8WTW3 980 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 PHLPP1O60346 1717 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 NFAT5O94916 1531 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 GOLGA6L10A6NI86 522 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 KIF1CO43896 1103 aaKnown RBP12.79□□□□□ -0.36
CCND1-201ENST00000227507 TFAP4Q01664 338 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
CCND1-201ENST00000227507 SH2D3CQ8N5H7 860 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 MSANTD4Q8NCY6 345 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 RBM28Q9NW13 759 aaKnown RBP12.79□□□□□ -0.36
CCND1-201ENST00000227507 HPCAL4Q9UM19 191 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 GYS1P13807 737 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 ADD2P35612 726 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 GUCY2FP51841 1108 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 RILPL1Q5EBL4 403 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 IQUBQ8NA54 791 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 CD209Q9NNX6 404 aa12.79□□□□□ -0.36
CCND1-201ENST00000227507 PPANQ9NQ55 473 aaKnown RBP12.79□□□□□ -0.36
CCND1-201ENST00000227507 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 CSF1RP07333 972 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 CALML3P27482 149 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 USP14P54578 494 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 IFT88Q13099 833 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 PRKG1Q13976 671 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 SULF1Q8IWU6 871 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 RGPD8O14715 1765 aaPredicted RBP12.78□□□□□ -0.36
CCND1-201ENST00000227507 SARNPP82979 210 aaKnown RBP12.78□□□□□ -0.36
CCND1-201ENST00000227507 TBX2Q13207 712 aaPredicted RBP12.78□□□□□ -0.36
CCND1-201ENST00000227507 E2F5Q15329 346 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 DCAF15Q66K64 600 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 RAB21Q9UL25 225 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 ZMYM6O95789 1325 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 AKR1B10O60218 316 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 NDUFA10O95299 355 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 GYPCP04921 128 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 GUCY1A2P33402 732 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 MTIF2P46199 727 aaKnown RBP12.78□□□□□ -0.36
CCND1-201ENST00000227507 ANTXR2P58335 489 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 KRT31Q15323 416 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 OR8K1Q8NGG5 319 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 MPHOSPH6Q99547 160 aaKnown RBP12.78□□□□□ -0.36
CCND1-201ENST00000227507 VPS54Q9P1Q0 977 aa12.78□□□□□ -0.36
CCND1-201ENST00000227507 CYLC1P35663 651 aaPredicted RBP12.77□□□□□ -0.36
CCND1-201ENST00000227507 MCAMP43121 646 aa12.77□□□□□ -0.36
CCND1-201ENST00000227507 PPFIA1Q13136 1202 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms