RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CD44P16070 742 aaKnown RBP28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 NFIAQ12857 509 aa28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 DLGAP5Q15398 846 aa28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 PDXDC2PQ6P474 469 aa28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 GPR161Q8N6U8 529 aaKnown RBP28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 DYNLL2Q96FJ2 89 aa28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 MRFAP1Q9Y605 127 aa28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 CLCN6P51797 869 aa28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 GOLGA8FQ08AF8 430 aa28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 GOLGA8DPQ0D2H9 430 aa28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 TOGARAM2Q6ZUX3 1019 aa28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 TDRD3Q9H7E2 651 aaKnown RBP28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 MTMR14Q8NCE2 650 aa28.07■■■□□ 2.08
RUNDC3A-201ENST00000225441 KIFC2Q96AC6 838 aa28.07■■■□□ 2.08
RUNDC3A-201ENST00000225441 ZNF446Q9NWS9 450 aa28.07■■■□□ 2.08
RUNDC3A-201ENST00000225441 NPM3O75607 178 aaKnown RBP28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 MMP14P50281 582 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 CACNB3P54284 484 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 ZNF658Q5TYW1 1059 aaPredicted RBP28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 JAKMIP3Q5VZ66 844 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 TMCO3Q6UWJ1 677 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 TCP11L1Q9NUJ3 509 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 ZNF541Q9H0D2 1346 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 MFAP3LO75121 409 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 HSP90AA4PQ58FG1 418 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 BLIDQ8IZY5 108 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 DAGLBQ8NCG7 672 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 CARD6Q9BX69 1037 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 FAM198AQ9UFP1 575 aa28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 DICER1Q9UPY3 1922 aaKnown RBP28.06■■■□□ 2.08
RUNDC3A-201ENST00000225441 TSPY2A6NKD2 308 aa28.05■■■□□ 2.08
RUNDC3A-201ENST00000225441 ZRANB2O95218 330 aaKnown RBP eCLIP28.05■■■□□ 2.08
RUNDC3A-201ENST00000225441 RASGRP2Q7LDG7 609 aa28.05■■■□□ 2.08
RUNDC3A-201ENST00000225441 TMTC1Q8IUR5 882 aa28.05■■■□□ 2.08
RUNDC3A-201ENST00000225441 RABGGTAQ92696 567 aa28.05■■■□□ 2.08
RUNDC3A-201ENST00000225441 KAT14Q9H8E8 782 aa28.05■■■□□ 2.08
RUNDC3A-201ENST00000225441 PCDHA4Q9UN74 947 aa28.05■■■□□ 2.08
RUNDC3A-201ENST00000225441 ADGRG1Q9Y653 693 aa28.05■■■□□ 2.08
RUNDC3A-201ENST00000225441 GJA3Q9Y6H8 435 aa28.05■■■□□ 2.08
RUNDC3A-201ENST00000225441 LAD1O00515 517 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 FANCGO15287 622 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 TEX33O43247 280 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 RBL2Q08999 1139 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 RCSD1Q6JBY9 416 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 PIK3AP1Q6ZUJ8 805 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 C16orf86Q6ZW13 317 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 LZTS2Q9BRK4 669 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 GMPSP49915 693 aaPredicted RBP28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 PAK1Q13153 545 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 KLHL10Q6JEL2 608 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 RSRC2Q7L4I2 434 aaKnown RBP28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 LRRN4CLQ8ND94 238 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 CCDC148Q8NFR7 591 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 WDR24Q96S15 920 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 ZNF287Q9HBT7 754 aa28.04■■■□□ 2.08
RUNDC3A-201ENST00000225441 SBF1O95248 1867 aa28.03■■■□□ 2.08
RUNDC3A-201ENST00000225441 hCG_1642624A0A1W2PR95 340 aa28.03■■■□□ 2.08
RUNDC3A-201ENST00000225441 WNT7AO00755 349 aa28.03■■■□□ 2.08
RUNDC3A-201ENST00000225441 ZNF280AP59817 542 aaPredicted RBP28.03■■■□□ 2.08
RUNDC3A-201ENST00000225441 PPP2R3AQ06190 1150 aa28.03■■■□□ 2.08
RUNDC3A-201ENST00000225441 GRM4Q14833 912 aa28.03■■■□□ 2.08
RUNDC3A-201ENST00000225441 C4orf32Q8N8J7 132 aa28.03■■■□□ 2.08
RUNDC3A-201ENST00000225441 ZBED3Q96IU2 234 aaPredicted RBP28.03■■■□□ 2.08
RUNDC3A-201ENST00000225441 MKNK2Q9HBH9 465 aa28.03■■■□□ 2.08
RUNDC3A-201ENST00000225441 H7C1D1 291 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 KIF5CO60282 957 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 RRAGBQ5VZM2 374 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 ZFPM1Q8IX07 1006 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 SLC44A5Q8NCS7 719 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 MYOZ2Q9NPC6 264 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 TMOD2Q9NZR1 351 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 MYO1AQ9UBC5 1043 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 FHOD1Q9Y613 1164 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 ENTPD3O75355 529 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 CDK8P49336 464 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 TCP10Q12799 353 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 KCNB1Q14721 858 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 TERF2Q15554 542 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 MAGEF1Q9HAY2 307 aa28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 ZNF70Q9UC06 446 aaPredicted RBP28.02■■■□□ 2.08
RUNDC3A-201ENST00000225441 SHTN1A0MZ66 631 aa28.01■■■□□ 2.07
RUNDC3A-201ENST00000225441 HLA-DOAP06340 250 aa28.01■■■□□ 2.07
RUNDC3A-201ENST00000225441 STX17P56962 302 aa28.01■■■□□ 2.07
RUNDC3A-201ENST00000225441 SPDYE2Q495Y8 402 aa28.01■■■□□ 2.07
RUNDC3A-201ENST00000225441 DHX36Q9H2U1 1008 aaKnown RBP28.01■■■□□ 2.07
RUNDC3A-201ENST00000225441 CTNND2Q9UQB3 1225 aa28.01■■■□□ 2.07
RUNDC3A-201ENST00000225441 PRPHP41219 470 aa28■■■□□ 2.07
RUNDC3A-201ENST00000225441 GABPAQ06546 454 aa28■■■□□ 2.07
RUNDC3A-201ENST00000225441 FAM47AQ5JRC9 791 aa28■■■□□ 2.07
RUNDC3A-201ENST00000225441 GOLGA1Q92805 767 aa28■■■□□ 2.07
RUNDC3A-201ENST00000225441 CUEDC2Q9H467 287 aa28■■■□□ 2.07
RUNDC3A-201ENST00000225441 CLRN2A0PK11 232 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 POTEB2H3BUK9 544 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 RPN1P04843 607 aaKnown RBP27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 PNMA6AP0CW24 399 aaPredicted RBP27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 RASA1P20936 1047 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 MCM7P33993 719 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 KRT31Q15323 416 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 PTPN21Q16825 1174 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 M0R2N6 131 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms