RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 CCDC17Q96LX7 622 aa10.88□□□□□ -0.67
CRX-201ENST00000221996 MAP3K14Q99558 947 aa10.88□□□□□ -0.67
CRX-201ENST00000221996 TNS2Q63HR2 1409 aa10.88□□□□□ -0.67
CRX-201ENST00000221996 TRIM49BA6NDI0 452 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 TOB1P50616 345 aaPredicted RBP10.87□□□□□ -0.67
CRX-201ENST00000221996 CACNB3P54284 484 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 LRRC41Q15345 812 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 E4F1Q66K89 784 aaPredicted RBP10.87□□□□□ -0.67
CRX-201ENST00000221996 TOGARAM2Q6ZUX3 1019 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 NBPF3Q9H094 633 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 SWAP70Q9UH65 585 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 KRT13P13646 458 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 NT5C2P49902 561 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 IFI16Q16666 785 aaKnown RBP10.87□□□□□ -0.67
CRX-201ENST00000221996 FAM26FQ5R3K3 315 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 CCDC174Q6PII3 467 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 KRT27Q7Z3Y8 459 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 TXNRD3Q86VQ6 643 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 COA1Q9GZY4 146 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 FAM217BQ9NTX9 383 aaPredicted RBP10.87□□□□□ -0.67
CRX-201ENST00000221996 BARHL2Q9NY43 387 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 HPSEQ9Y251 543 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 CHD2O14647 1828 aaKnown RBP10.87□□□□□ -0.67
CRX-201ENST00000221996 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
CRX-201ENST00000221996 PRCPP42785 496 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 SLC9C1Q4G0N8 1177 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 TCP11X2Q5H9J9 407 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 PRR5LQ6MZQ0 368 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 HDXQ7Z353 690 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 PANX2Q96RD6 677 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 IFIH1Q9BYX4 1025 aaKnown RBP10.87□□□□□ -0.67
CRX-201ENST00000221996 KIAA1024Q9UPX6 916 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 BAZ2BQ9UIF8 2168 aaKnown RBP10.87□□□□□ -0.67
CRX-201ENST00000221996 CNTNAP4Q9C0A0 1308 aa10.87□□□□□ -0.67
CRX-201ENST00000221996 TUBBP07437 444 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 FBXO11Q86XK2 927 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 SPICE1Q8N0Z3 855 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 PANK4Q9NVE7 773 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 VPS18Q9P253 973 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 AFF2P51816 1311 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 CNTNAP5Q8WYK1 1306 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 KDM3AQ9Y4C1 1321 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 MFAP3LO75121 409 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 GDF11O95390 407 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 EPB41P11171 864 aaKnown RBP10.86□□□□□ -0.67
CRX-201ENST00000221996 ADRA2BP18089 450 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 CCNE1P24864 410 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 SSR1P43307 286 aaKnown RBP10.86□□□□□ -0.67
CRX-201ENST00000221996 SEC23AQ15436 765 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 TBC1D5Q92609 795 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 HAUS4Q9H6D7 363 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 MYL1P05976 194 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 CYP4A11Q02928 519 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 DLGAP5Q15398 846 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 ABCB5Q2M3G0 1257 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 NEDD1Q8NHV4 660 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 KIFC2Q96AC6 838 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 GJD4Q96KN9 370 aaPredicted RBP10.86□□□□□ -0.67
CRX-201ENST00000221996 SAR1BQ9Y6B6 198 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 TCP10L2B9ZVM9 353 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 GCNT3O95395 438 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 MMP10P09238 476 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 TXNRD1Q16881 649 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 CPXCR1Q8N123 301 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 TMEM260Q9NX78 707 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 CALCOCO1Q9P1Z2 691 aa10.86□□□□□ -0.67
CRX-201ENST00000221996 JCADQ9P266 1359 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 SMIM22K7EJ46 135 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 DDX39AO00148 427 aaKnown RBP10.85□□□□□ -0.67
CRX-201ENST00000221996 ACTN4O43707 911 aaKnown RBP10.85□□□□□ -0.67
CRX-201ENST00000221996 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
CRX-201ENST00000221996 MAEAQ7L5Y9 396 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 MRPL44Q9H9J2 332 aaKnown RBP10.85□□□□□ -0.67
CRX-201ENST00000221996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.85□□□□□ -0.67
CRX-201ENST00000221996 STK32BQ9NY57 414 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 CDC23Q9UJX2 597 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 KDM4FA0A1W2PPD8 638 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 CCDC172P0C7W6 258 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 RNASE9P60153 205 aaKnown RBP10.85□□□□□ -0.67
CRX-201ENST00000221996 FBXO38Q6PIJ6 1188 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 TPH2Q8IWU9 490 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 JDP2Q8WYK2 163 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 SH2D4AQ9H788 454 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 H0YHG0 523 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 ENC1O14682 589 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 SLC10A5Q5PT55 438 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 FLAD1Q8NFF5 587 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 AMNQ9BXJ7 453 aa10.85□□□□□ -0.67
CRX-201ENST00000221996 KLHL30Q0D2K2 578 aa10.84□□□□□ -0.67
CRX-201ENST00000221996 ASIC2Q16515 512 aa10.84□□□□□ -0.67
CRX-201ENST00000221996 MYCT1Q8N699 235 aa10.84□□□□□ -0.67
CRX-201ENST00000221996 ANKRD13CQ8N6S4 541 aa10.84□□□□□ -0.67
CRX-201ENST00000221996 LSM14BQ9BX40 385 aaKnown RBP10.84□□□□□ -0.67
CRX-201ENST00000221996 TSPYL1Q9H0U9 437 aa10.84□□□□□ -0.67
CRX-201ENST00000221996 KANSL2Q9H9L4 492 aa10.84□□□□□ -0.67
CRX-201ENST00000221996 STK17AQ9UEE5 414 aa10.84□□□□□ -0.67
CRX-201ENST00000221996 MRC1P22897 1456 aa10.84□□□□□ -0.67
CRX-201ENST00000221996 PNMA6FA0A0J9YX94 578 aa10.84□□□□□ -0.67
CRX-201ENST00000221996 POTEMA6NI47 508 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms