RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 MYH15Q9Y2K3 1946 aa12.47□□□□□ -0.41
NEFM-201ENST00000221166 USP14P54578 494 aa12.47□□□□□ -0.41
NEFM-201ENST00000221166 NPY5RQ15761 445 aa12.47□□□□□ -0.41
NEFM-201ENST00000221166 TXNRD1Q16881 649 aa12.47□□□□□ -0.41
NEFM-201ENST00000221166 ANKRD40Q6AI12 368 aa12.47□□□□□ -0.41
NEFM-201ENST00000221166 FOXR1Q6PIV2 292 aa12.47□□□□□ -0.41
NEFM-201ENST00000221166 HNRNPLLQ8WVV9 542 aaKnown RBP12.47□□□□□ -0.41
NEFM-201ENST00000221166 GPR101Q96P66 508 aaPredicted RBP12.47□□□□□ -0.41
NEFM-201ENST00000221166 CENPHQ9H3R5 247 aa12.47□□□□□ -0.41
NEFM-201ENST00000221166 NLRC4Q9NPP4 1024 aa12.47□□□□□ -0.41
NEFM-201ENST00000221166 STK4Q13043 487 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 C6orf50Q9HD87 102 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 TBC1D7Q9P0N9 293 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 RAB21Q9UL25 225 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 KCNQ2O43526 872 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 MOCS3O95396 460 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 BAG3O95817 575 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 HERVK_113P62684 666 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 NONOQ15233 471 aaKnown RBP eCLIP12.46□□□□□ -0.41
NEFM-201ENST00000221166 LRRC41Q15345 812 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 CCDC40Q4G0X9 1142 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 USP17L2Q6R6M4 530 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 TNFRSF25Q93038 417 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 MLXIPQ9HAP2 919 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 CAPN11Q9UMQ6 739 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 REXO2Q9Y3B8 237 aaKnown RBP12.46□□□□□ -0.41
NEFM-201ENST00000221166 ADAMTS7Q9UKP4 1686 aa12.46□□□□□ -0.41
NEFM-201ENST00000221166 BUB1O43683 1085 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 OR52Z1P0C646 297 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 EPS15P42566 896 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 MAGEA1P43355 309 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 SPTY2D1Q68D10 685 aaPredicted RBP12.46□□□□□ -0.42
NEFM-201ENST00000221166 SV2BQ7L1I2 683 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 NUP58Q9BVL2 599 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 THAP9Q9H5L6 903 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 SMARCAL1Q9NZC9 954 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 FEZ2Q9UHY8 353 aaPredicted RBP12.46□□□□□ -0.42
NEFM-201ENST00000221166 PCDHA6Q9UN73 950 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 PCDHA8Q9Y5H6 950 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 LRRC10BA6NIK2 292 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 PLEKP08567 350 aaPredicted RBP12.46□□□□□ -0.42
NEFM-201ENST00000221166 PCP11498 1178 aaKnown RBP12.46□□□□□ -0.42
NEFM-201ENST00000221166 IRF2BP1Q8IU81 584 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 ALS2CR12Q96Q35 445 aa12.46□□□□□ -0.42
NEFM-201ENST00000221166 GOLGA6BA6NDN3 693 aa12.45□□□□□ -0.42
NEFM-201ENST00000221166 CCNE1P24864 410 aa12.45□□□□□ -0.42
NEFM-201ENST00000221166 SH3RF3Q8TEJ3 882 aaPredicted RBP12.45□□□□□ -0.42
NEFM-201ENST00000221166 IFT81Q8WYA0 676 aa12.45□□□□□ -0.42
NEFM-201ENST00000221166 ORC4O43929 436 aa12.45□□□□□ -0.42
NEFM-201ENST00000221166 KRT18P05783 430 aaKnown RBP12.45□□□□□ -0.42
NEFM-201ENST00000221166 TNNI2P48788 182 aa12.45□□□□□ -0.42
NEFM-201ENST00000221166 ZBED6P86452 979 aa12.45□□□□□ -0.42
NEFM-201ENST00000221166 FAM76AQ8TAV0 307 aa12.45□□□□□ -0.42
NEFM-201ENST00000221166 RRP36Q96EU6 259 aaKnown RBP12.45□□□□□ -0.42
NEFM-201ENST00000221166 SRP68Q9UHB9 627 aaKnown RBP12.45□□□□□ -0.42
NEFM-201ENST00000221166 GGCXP38435 758 aa12.45□□□□□ -0.42
NEFM-201ENST00000221166 DHTKD1Q96HY7 919 aaPredicted RBP12.45□□□□□ -0.42
NEFM-201ENST00000221166 MED4Q9NPJ6 270 aa12.45□□□□□ -0.42
NEFM-201ENST00000221166 BCL9O00512 1426 aa12.45□□□□□ -0.42
NEFM-201ENST00000221166 FAM170AA1A519 330 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 GOLGA6CA6NDK9 693 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 GOLGA6DP0CG33 693 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 EIF4A3P38919 411 aaKnown RBP12.44□□□□□ -0.42
NEFM-201ENST00000221166 CNNM4Q6P4Q7 775 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 TXNRD3Q86VQ6 643 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 ZNF384Q8TF68 577 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 NOC3LQ8WTT2 800 aaKnown RBP12.44□□□□□ -0.42
NEFM-201ENST00000221166 GOLGA6AQ9NYA3 693 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 ZNF804BA4D1E1 1349 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 RCCD1A6NED2 376 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 TMEM266Q2M3C6 531 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 FRMPD2Q68DX3 1309 aaPredicted RBP12.44□□□□□ -0.42
NEFM-201ENST00000221166 NCK2O43639 380 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 GNA11P29992 359 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 PTPROQ16827 1216 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 WDR59Q6PJI9 974 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 TBCKQ8TEA7 893 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 TSG101Q99816 390 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 TMEM47Q9BQJ4 181 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 UBXN6Q9BZV1 441 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 EHD2Q9NZN4 543 aa12.44□□□□□ -0.42
NEFM-201ENST00000221166 TRAF5O00463 557 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 PICALMQ13492 652 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 NAALADL2Q58DX5 795 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 PLCD3Q8N3E9 789 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 SELENOOQ9BVL4 669 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.43□□□□□ -0.42
NEFM-201ENST00000221166 TJP1Q07157 1748 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 PSMD14O00487 310 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 SRGNP10124 158 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 RASSF7Q02833 373 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 KRT25Q7Z3Z0 450 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 NEK8Q86SG6 692 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 NELFCDQ8IXH7 590 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 EYA3Q99504 573 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 ANKRD2Q9GZV1 360 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 TMEM260Q9NX78 707 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms