RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 METTL14Q9HCE5 456 aaKnown RBP11.56□□□□□ -0.56
TRPS1-201ENST00000220888 PLCB1Q9NQ66 1216 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 BLMP54132 1417 aaPredicted RBP11.56□□□□□ -0.56
TRPS1-201ENST00000220888 BNIP3LO60238 219 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 ATP5JP18859 108 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 NSFP46459 744 aaKnown RBP11.56□□□□□ -0.56
TRPS1-201ENST00000220888 CYP4A11Q02928 519 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 IQCB1Q15051 598 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 VSIG1Q86XK7 387 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 LRRC4Q9HBW1 653 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 E7EWF7 191 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 GDF11O95390 407 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 GNAT1P11488 350 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 GARSP41250 739 aaKnown RBP11.55□□□□□ -0.56
TRPS1-201ENST00000220888 PPP2R3AQ06190 1150 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 ANKRD20A3Q5VUR7 823 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 JADE1Q6IE81 842 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 HDXQ7Z353 690 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 ATP6V1E2Q96A05 226 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 PIDD1Q9HB75 910 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 MOSPD1Q9UJG1 213 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 TMEM94Q12767 1356 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 TNKSO95271 1327 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 DDAH1O94760 285 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 ZNF202O95125 648 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 SLC4A1P02730 911 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 NPR1P16066 1061 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 PTK2Q05397 1052 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 ASPRV1Q53RT3 343 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 NDUFAF2Q8N183 169 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 HAUS8Q9BT25 410 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 DHX36Q9H2U1 1008 aaKnown RBP11.55□□□□□ -0.56
TRPS1-201ENST00000220888 H7C0C1 242 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 CHL1O00533 1208 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 TTLL1O95922 423 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 SCG2P13521 617 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 ATP5OP48047 213 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 UBXN2AP68543 259 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 ATP11AP98196 1134 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 NFX1Q12986 1120 aaKnown RBP11.55□□□□□ -0.56
TRPS1-201ENST00000220888 CFAP221Q4G0U5 840 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 SH2D4BQ5SQS7 431 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 SMC5Q8IY18 1101 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 MTIF3Q9H2K0 278 aaKnown RBP11.55□□□□□ -0.56
TRPS1-201ENST00000220888 MAP3K7O43318 606 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
TRPS1-201ENST00000220888 ECE1P42892 770 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 RECQLP46063 649 aaPredicted RBP11.55□□□□□ -0.56
TRPS1-201ENST00000220888 FANCCQ00597 558 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 MYO1EQ12965 1108 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 DSTYKQ6XUX3 929 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 C10orf67Q8IYJ2 551 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 ARHGEF2Q92974 986 aaKnown RBP11.55□□□□□ -0.56
TRPS1-201ENST00000220888 RAB17Q9H0T7 212 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 SLC38A10Q9HBR0 1119 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 NFE2L3Q9Y4A8 694 aa11.55□□□□□ -0.56
TRPS1-201ENST00000220888 USP17L3A6NCW0 530 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 USP17L4A6NCW7 530 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 PCP11498 1178 aaKnown RBP11.54□□□□□ -0.56
TRPS1-201ENST00000220888 ARHGAP4P98171 946 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 USP17L1Q7RTZ2 530 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.54□□□□□ -0.56
TRPS1-201ENST00000220888 CDKL2Q92772 493 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 USP26Q9BXU7 913 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 FAM170AA1A519 330 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 RAB44Q7Z6P3 723 aaPredicted RBP11.54□□□□□ -0.56
TRPS1-201ENST00000220888 FANCBQ8NB91 859 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 N4BP2L2Q92802 583 aaPredicted RBP11.54□□□□□ -0.56
TRPS1-201ENST00000220888 PPP2R3CQ969Q6 453 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 PCDHB4Q9Y5E5 795 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 SNX14Q9Y5W7 946 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 COL17A1Q9UMD9 1497 aaPredicted RBP11.54□□□□□ -0.56
TRPS1-201ENST00000220888 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
TRPS1-201ENST00000220888 CLGNO14967 610 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 BMP3P12645 472 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 BFSP1Q12934 665 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 NAA25Q14CX7 972 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 UNC5CLQ8IV45 518 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 CEP170P1Q96L14 293 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 WDR11Q9BZH6 1224 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 KMT5AQ9NQR1 393 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 ABCD1P33897 745 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 MTMR3Q13615 1198 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 RC3H1Q5TC82 1133 aaKnown RBP11.54□□□□□ -0.56
TRPS1-201ENST00000220888 ADALQ6DHV7 355 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 ARMCX2Q7L311 632 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 SIX6OS1Q8N1H7 587 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 C7orf31Q8N865 590 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 GPKOWQ92917 476 aaPredicted RBP eCLIP11.54□□□□□ -0.56
TRPS1-201ENST00000220888 PGBD1Q96JS3 809 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 RNF181Q9P0P0 153 aa11.54□□□□□ -0.56
TRPS1-201ENST00000220888 MMP10P09238 476 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 ADCY8P40145 1251 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 NLRP12P59046 1061 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 PAK2Q13177 524 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 MICALL1Q8N3F8 863 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 NT5C1BQ96P26 610 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 IFIH1Q9BYX4 1025 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms